Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P16
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1412 + 29993566-29993873,29993960-29994583,29994665-299948...    31   1.6  
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    30   2.8  
01_01_1013 - 8015552-8015613,8016898-8018035                           29   3.8  
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    28   8.7  

>06_03_1412 +
           29993566-29993873,29993960-29994583,29994665-29994800,
           29995108-29995196,29995299-29995413,29995565-29995628,
           29995711-29995782,29995906-29996153
          Length = 551

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/69 (23%), Positives = 27/69 (39%)
 Frame = +1

Query: 424 SDQYKLADAFSRTANLFRSEVDNINFSAPKNXADIINRWADEQTQGHIKTPVSEDKLTPP 603
           S    LA A +    +   EV  + F      + I+ RWA+E+    +  P   + +  P
Sbjct: 4   SSYLALALAVAAVLAMAAVEVSGLGFDLHHRYSPIVQRWAEERGHAGVSWPAGAEVIGSP 63

Query: 604 RPLAMFXRH 630
              +   RH
Sbjct: 64  EYYSALSRH 72


>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 340 TLEPPLPQGFPLSLPWTVHRLQTRXK 263
           +L PPLP G PLS P+     QT  K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776


>01_01_1013 - 8015552-8015613,8016898-8018035
          Length = 399

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +3

Query: 186 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 359
           I K  +++AD   ++ S    +L+  S+  +W+   V    +  PWG  G  V+ T +  
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212

Query: 360 IKSALRRIRPEILDCRQ*NIRFRPV 434
           +  +   +  +I   RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = +2

Query: 311 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 490
           K+  +G L +++   +  + + +N T  +  S  K   P S S   RSP +R  S  +  
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434

Query: 491 TLTSALRRMXLISSTVGRTN 550
                  ++ LIS    +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,050,459
Number of Sequences: 37544
Number of extensions: 441227
Number of successful extensions: 1053
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)