Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P15
         (873 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb...    29   0.86 
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe...    28   1.5  
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi...    28   2.0  
SPAC1952.05 |gcn5||histone acetyltransferase Gcn5|Schizosaccharo...    26   8.1  

>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 504

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 309 LASSISVFRTFKSTSPLRQFPKVRNAASTSRDFVFSI 199
           L  S  VFR F+S++P   FP V  A   SR F  S+
Sbjct: 9   LQLSWQVFRRFQSSNPQLSFPCVDQAQERSRQFEQSL 45


>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 317

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 24/88 (27%), Positives = 40/88 (45%)
 Frame = -1

Query: 351 SQYFLKTSSSAPFGLASSISVFRTFKSTSPLRQFPKVRNAASTSRDFVFSIVLGALRGHN 172
           S YF+ +SSS P   +SS S   +  S+          +++S+S+    S         +
Sbjct: 143 SSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSS 202

Query: 171 RCNLX*SHQPTHRQRKSLSRQSSTSFVT 88
             +   S  P+    KS S+ SS+SF+T
Sbjct: 203 SSSSKSSASPS--SSKSSSKFSSSSFIT 228


>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 542

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 17/69 (24%), Positives = 37/69 (53%)
 Frame = +2

Query: 263 GLVDLNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGVRPCVGNEYANHIND 442
           GL  +N+L + ++ +K    LD+V     D + +L  C++S+L+  +   G+E    +  
Sbjct: 85  GLKIVNILSS-LDSSKWEAYLDQVVN--ADSADELTVCLTSILKKAKIIPGSEARVFVGY 141

Query: 443 AQNSTNQLI 469
              ST++++
Sbjct: 142 DSRSTSEIL 150


>SPAC1952.05 |gcn5||histone acetyltransferase
           Gcn5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 454

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 413 GNEYANHINDAQNSTNQLIDFVCYKDGXRIALFIAEG 523
           G+   NH+ D    T  +  F+ Y D   I  F  +G
Sbjct: 207 GSHLMNHLKDYVRGTTTIQHFLTYADNYAIGYFKKQG 243


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,290,253
Number of Sequences: 5004
Number of extensions: 61711
Number of successful extensions: 148
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)