Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P13
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40933-2|AAL27242.1|  158|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U39678-4|AAK39211.2|  330|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical ...    28   9.9  

>U40933-2|AAL27242.1|  158|Caenorhabditis elegans Hypothetical
           protein F20D12.7 protein.
          Length = 158

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -2

Query: 576 VFSHESSDNFXEELRESFPVRLVVVEVGGRQEIMVGTFQIQ*G 448
           V S + SD   EE+ E   V LV++ +GGR   +VGT ++  G
Sbjct: 77  VNSTDGSDE-EEEITEPSSVLLVMITMGGRMANVVGTMKLYKG 118


>U39678-4|AAK39211.2|  330|Caenorhabditis elegans Hypothetical
           protein C39D10.3a protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = +3

Query: 324 GRLMLSERRPRMQT----DFKSAALQRVLRPIQGQP 419
           GRLML  ++  M+T    DFKSA L   L P+  +P
Sbjct: 115 GRLMLVTKKHHMETDSILDFKSAILPFALDPLSNEP 150


>AF067211-1|AAC16986.1|  455|Caenorhabditis elegans Hypothetical
           protein B0205.10 protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +1

Query: 730 PLPXRIFLHPQXSPLKTPDLLPRCPXSSTTSXAAFPE 840
           P+P    L PQ +P  TPD     P   T   A  PE
Sbjct: 90  PVPEPAQLAPQSAPEPTPDAPAAAPVQETPQVAPAPE 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,020,178
Number of Sequences: 27780
Number of extensions: 332523
Number of successful extensions: 832
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)