Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P12
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0063 - 3749675-3749734,3750264-3750309,3750851-3751422,375...    29   3.7  
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331...    29   4.9  
06_03_0912 + 25896152-25896451,25896528-25897296,25897492-258976...    29   6.5  

>09_02_0063 -
           3749675-3749734,3750264-3750309,3750851-3751422,
           3751531-3751686
          Length = 277

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 209 VYNGFKPGYDEGEFDKANKH 268
           VYN FKPG+D G F    +H
Sbjct: 180 VYNKFKPGFDSGAFVPIGQH 199


>02_02_0661 -
           12731005-12731238,12732756-12732884,12732969-12733193,
           12733302-12733478,12733576-12733788
          Length = 325

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = +3

Query: 486 TTVDNLNDIVYLATDNGVYK 545
           T+V+ +N++VY A +NGVYK
Sbjct: 174 TSVNEINELVYDAINNGVYK 193


>06_03_0912 + 25896152-25896451,25896528-25897296,25897492-25897658,
            25898932-25901013,25901155-25901730,25904503-25905648,
            25907056-25908693
          Length = 2225

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/75 (28%), Positives = 30/75 (40%)
 Frame = +3

Query: 249  LIKQINTQHFCANILKINNFYYSLAERKNLSGIPADISIHWKTGNIFFTKISEEMKMSLX 428
            L K  + Q     I  + N   SL E + L+     + + W   N        E K  L 
Sbjct: 1321 LYKHYDGQSSSLVIKNLENLKGSLGEVQELAKYQ-QVRLVWSRSNFIEDSSMAEDKAVLQ 1379

Query: 429  VLRPSGEFETIKVAG 473
             LRP  + ETI++ G
Sbjct: 1380 KLRPHHDLETIEIEG 1394


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,807,463
Number of Sequences: 37544
Number of extensions: 323910
Number of successful extensions: 550
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 550
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)