Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P10
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       35   0.11 
01_01_0570 - 4231100-4232560                                           31   1.8  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 26/104 (25%), Positives = 29/104 (27%)
 Frame = +1

Query: 628 PPXXPFFPXXAQIXXXXXXXSXXXXXPXWI*XXPXFXGXPPPVFSLXXXPXSFFXAGXXP 807
           PP  PF P            S     P +    P +   PPP F     P  F      P
Sbjct: 234 PPPPPFLPFPLPPIPFLTPPSPPP--PAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPP 291

Query: 808 PPKXXXPSPFXXXXXXXXKKTLXXXXXXSPXSFPPRXPXXXAXP 939
           PP    P PF           L       P   PP  P   + P
Sbjct: 292 PPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFP 335



 Score = 28.3 bits (60), Expect = 9.4
 Identities = 19/76 (25%), Positives = 19/76 (25%)
 Frame = +1

Query: 712 WI*XXPXFXGXPPPVFSLXXXPXSFFXAGXXPPPKXXXPSPFXXXXXXXXKKTLXXXXXX 891
           W    P     PPP       P  F      PPP    P P                   
Sbjct: 225 WFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIF 284

Query: 892 SPXSFPPRXPXXXAXP 939
           SP S PP  P     P
Sbjct: 285 SPPSPPPPPPPAFPFP 300


>01_01_0570 - 4231100-4232560
          Length = 486

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 37/153 (24%), Positives = 41/153 (26%)
 Frame = -1

Query: 939 GXGRXXGXSGGKRXGGXXXAXAXRFFXXXXXXXXKXXXGXXFGGGXXSRXKKRXGXVXKR 760
           G G   G  GG R GG   A     F            G  FGGG  +      G     
Sbjct: 131 GSGGGVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGAGAGGGVGGGG---- 186

Query: 759 KXRGGXPXKXGXXLNPXGXXXXXXXXXXXXFYLGXXGEKGGXGGXXPXXXGXFXXIFXXG 580
           +  GG     G      G               G  G  GG GG      G    I   G
Sbjct: 187 RFGGGGMGGGGGFGGGAGGGVGGGGELGGGGMGGGSGFGGGAGGGFGAGGGVGGGIGVGG 246

Query: 579 XXXGKLGGXVLGGXXXXVXXXHXXGXVXKXGGG 481
              G   G + GG    +      G     GGG
Sbjct: 247 GMGGGASGGIGGGAGGGMGGDIGGGAGGGVGGG 279


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,632
Number of Sequences: 37544
Number of extensions: 165348
Number of successful extensions: 187
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)