Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P05
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,130...    31   0.94 
12_02_1174 - 26696869-26698191                                         29   3.8  
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699...    29   5.0  
11_06_0016 - 19284810-19284926,19285527-19286879                       29   6.7  
07_01_0862 - 7172083-7172931                                           29   6.7  
12_02_0299 - 17051570-17052474,17053542-17053755                       28   8.8  
10_08_0187 + 15592130-15592512,15592597-15592972                       28   8.8  

>08_01_0162 -
           1302497-1302787,1304608-1305271,1305380-1306927,
           1307360-1308768
          Length = 1303

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = -3

Query: 224 SIFLKSFHLGSGAALTAPRASTNAKTKLKIRTKFILPKFYSAGEFKIPNTISFDANAKND 45
           SI     HLG G  L+ PR   +     K+  K +LP+  S G F    T SF+ +  + 
Sbjct: 219 SILAMRLHLGYG--LSGPRHRPDYNLSYKVDLKSVLPELVSVG-FSASTTTSFELHQLHS 275

Query: 44  QILRNSL 24
               +SL
Sbjct: 276 WYFSSSL 282


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 622 PPPXPPXKKXIPRXLXVCPXXMYCXPTXKXVXXLHPXXPPXPXP 753
           PPP PP     PR   V P  +   P  +    L P  PP P P
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVV--QPKPQPPPSLQPPSPPPPPP 195


>05_07_0200 -
           28368890-28369021,28369169-28369303,28369918-28369947,
           28370019-28370093,28370222-28370333,28370440-28370621,
           28370723-28370854,28372193-28373479
          Length = 694

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +1

Query: 622 PPPXPPXKKXIPRXLXVCPXXMYCXPTXKXVXXLHPXXPPXPXPP 756
           PPP PP    +PR     P      P+        P  PP P PP
Sbjct: 309 PPPPPPPPPPMPRSRSASP-----SPSTSSSGSAGPPAPPPPPPP 348


>11_06_0016 - 19284810-19284926,19285527-19286879
          Length = 489

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/45 (28%), Positives = 15/45 (33%)
 Frame = +1

Query: 622 PPPXPPXKKXIPRXLXVCPXXMYCXPTXKXVXXLHPXXPPXPXPP 756
           PPP PP  +  P      P   Y       +  L P   P   PP
Sbjct: 90  PPPPPPPPRPAPSLASALPFWFYLTAAVSLLALLLPHLLPSSSPP 134


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +1

Query: 622 PPPXPPXKKXIPRXLXVCP---XXMYCXPTXKXVXXLHPXXPPXPXPP 756
           PPP PP KK +   L + P     +Y  P       L P  PP P PP
Sbjct: 147 PPPLPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPP-PQPP 193


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/48 (29%), Positives = 15/48 (31%)
 Frame = +1

Query: 613 FYXPPPXPPXKKXIPRXLXVCPXXMYCXPTXKXVXXLHPXXPPXPXPP 756
           F  P P PP     P      P   +  P         P  PP P PP
Sbjct: 284 FSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPP 331


>10_08_0187 + 15592130-15592512,15592597-15592972
          Length = 252

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 622 PPPXPPXKKXIPRXLXVCPXXMYC 693
           PPP PP +  + R   +CP   +C
Sbjct: 21  PPPPPPAQLKVRRLCALCPFDTFC 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,179,731
Number of Sequences: 37544
Number of extensions: 302254
Number of successful extensions: 707
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)