Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P04
         (905 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    28   0.34 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.6  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 28.3 bits (60), Expect = 0.34
 Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
 Frame = +2

Query: 179 KXXXGXPGXPXKEKXPGKK-XKXXKXXRGXPG-RGTPPXXGEXGP-XXXXXPXXGGXXPP 349
           K   G PG P  E  PG K  K      G PG +G     G+ GP      P   G   P
Sbjct: 446 KGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIP 505

Query: 350 KXPXXXGXPGXP 385
                 G  G P
Sbjct: 506 GQKGNAGMAGFP 517



 Score = 24.6 bits (51), Expect = 4.2
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 191 GXPGXPXKEKXPGKKXKXXKXXRGXPG-RGTPPXXGEXG 304
           G PG P K+  PG+  +  K   G PG +G     G+ G
Sbjct: 712 GAPGAPGKDGLPGRHGQTVK---GEPGLKGNVGYSGDKG 747


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = +2

Query: 191 GXPGXPXKEKXPGKKX-KXXKXXRGXPGRGTPPXXGEXG 304
           G PG    +  PG +     K   G PG G P   GE G
Sbjct: 320 GVPGLRGNDGIPGLEGPSGPKGDAGVPGYGRPGPQGEKG 358



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
 Frame = +2

Query: 179 KXXXGXPGXPXKEKXPGKKXKXXKXXRGXPGR-GTPPXXGEXGPXXXXXPXXGGXXPPKX 355
           K   G PG       PG+K +  +  +  P R G P   G  GP        G   P   
Sbjct: 683 KGDRGLPGMSGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKG-LPGLAGPAGI 741

Query: 356 PXXXGXPG 379
           P   G PG
Sbjct: 742 PGAPGAPG 749



 Score = 24.2 bits (50), Expect = 5.5
 Identities = 27/106 (25%), Positives = 31/106 (29%), Gaps = 7/106 (6%)
 Frame = +2

Query: 191 GXPGXPXKEKXPGKKXKXXKXXR-GXPGRGTPPXX-GEXGPXXXXXPXX-----GGXXPP 349
           G  G P  +   G K +  +  R G  G   PP   G  GP             G   PP
Sbjct: 15  GEKGAPGIQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVGPP 74

Query: 350 KXPXXXGXPGXPXXGXGXXXPXXSXXXGXXXPPXPHFRXXVPGXGG 487
             P   G PG P    G              PP P     + G  G
Sbjct: 75  GAPGRDGMPGAPGL-PGSKGVKGDPGLSMVGPPGPKGNPGLRGPKG 119


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 590 PXPPXPXXGGRGGGP 546
           P PP P  GG  GGP
Sbjct: 298 PRPPMPMQGGAPGGP 312


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/37 (29%), Positives = 12/37 (32%)
 Frame = +3

Query: 378 GXPXXXGXXXPPXXAXXXGXXPPPXPILGSXSRGXGG 488
           G P       PP         PPP P+ G    G  G
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAG 608


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 11/35 (31%), Positives = 12/35 (34%)
 Frame = +2

Query: 344 PPKXPXXXGXPGXPXXGXGXXXPXXSXXXGXXXPP 448
           PP+     G PG P    G   P      G   PP
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,677
Number of Sequences: 2352
Number of extensions: 4942
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)