Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_P03
(945 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.033
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.059
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.059
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.077
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.18
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.24
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.95
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 28 1.7
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.2
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 2.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 7.7
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect(2) = 0.033
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 692 PPPXXPPPPPXPPXPXXXXPPXXPP 766
PP PPPPP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXPXXXXPPXXP 763
P PPP PPPPP P PP P
Sbjct: 6 PGNPPP--PPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXPXXXXPPXXPP 766
P PP PPPPP P PP PP
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPPPP 30
Score = 20.6 bits (41), Expect(2) = 0.033
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 854 PPXPPPP 874
PP PPPP
Sbjct: 24 PPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXPXXXXPPXXPP 766
P PP PPPP PP P PP PP
Sbjct: 1707 PPPPPMSVPPPPSAPPMP--AGPPSAPP 1732
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 326 PPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPPAXG 475
PP PPPP PP P P P P P +P P G
Sbjct: 1699 PPQMSAPTPPPPPM-SVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.5 bits (63), Expect = 0.72
Identities = 21/71 (29%), Positives = 23/71 (32%)
Frame = +2
Query: 203 GGKPP*KXGXXPPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPP 382
GG P PP P+ P P P PP+AP PP PP
Sbjct: 1679 GGMAPAHPVSTPPV--RPQSAAPPQM-SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Query: 383 XPLXAPXNXNP 415
AP NP
Sbjct: 1736 PASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Frame = +2
Query: 683 PXXPPPXXPPPP-PXPPXPXXXXPPXXPP 766
P P PPPP PP P P PP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Frame = +2
Query: 683 PXXPP-PXXPPPPPXPPXPXXXXPPXXPP 766
P PP P PP P PP P P P
Sbjct: 1718 PSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 695 PPXXPPPPPXPPXPXXXXPPXXPP 766
PP P P PP PP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.059
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXPXXXXPPXXPP 766
P P PPPPP PP PP PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.5 bits (68), Expect = 0.18
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +2
Query: 290 PXPGSXXXXXXXPPAAPXXXPPP-PXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPP 466
P P P AP PPP P GPPP P P G P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--------PPPGVAGAGPPPPPPPPP 783
Query: 467 A 469
A
Sbjct: 784 A 784
Score = 30.3 bits (65), Expect = 0.41
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 326 PPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPPAXGP 478
PP P P P P P P AP P P G P PP P
Sbjct: 733 PPPPPAVIVPTPAP-APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect(2) = 0.36
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 692 PPPXXPPPPPXPPXPXXXXPPXXPP 766
P P P P PP P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 326 PPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPPAXGP 478
PPA P P PPP P+ P P G P PP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGP---PPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 692 PPPXXPPPPPXPPXPXXXXPPXXPP 766
PPP PPPPP PP PP
Sbjct: 761 PPP--PPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 4/32 (12%)
Frame = +2
Query: 683 PXXPPPXXP----PPPPXPPXPXXXXPPXXPP 766
P PP P PPPP PP P PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 692 PPPXXPPPPPXPPXPXXXXPPXXPP 766
PPP PPP P P P PP
Sbjct: 732 PPP--PPPAVIVPTPAPAPIPVPPP 754
Score = 20.6 bits (41), Expect(2) = 7.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 854 PPXPPPP 874
PP PPPP
Sbjct: 761 PPPPPPP 767
Score = 20.6 bits (41), Expect(2) = 0.36
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 854 PPXPPPP 874
PP PPPP
Sbjct: 762 PPPPPPP 768
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.077
Identities = 26/92 (28%), Positives = 28/92 (30%)
Frame = +2
Query: 203 GGKPP*KXGXXPPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPP 382
G P K P P G P P P + P AP P P P P
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPV----PKPAAGVPPVPPPSEAP-PVPKPSVGVPPVP 1211
Query: 383 XPLXAPXNXNPXKGXXPRXPXGGSPXPPAXGP 478
P AP P G P P + PP P
Sbjct: 1212 PPSTAPPVPTPSAGLPP-VPVPTAKAPPVPAP 1242
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 4/81 (4%)
Frame = +2
Query: 236 PPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPP---PXXXGPP-PXPLXAPX 403
PP K P G P P AP PP P PP P P AP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 404 NXNPXKGXXPRXPXGGSPXPP 466
P G P P +P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVP 1220
Score = 29.5 bits (63), Expect = 0.72
Identities = 22/77 (28%), Positives = 25/77 (32%)
Frame = +2
Query: 236 PPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXNXNP 415
PP K P G P P AP PP P P P+ AP + P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP-PVPAPSSGIP 1179
Query: 416 XKGXXPRXPXGGSPXPP 466
P+ G P PP
Sbjct: 1180 ---PVPKPAAGVPPVPP 1193
Score = 29.1 bits (62), Expect = 0.95
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Frame = +2
Query: 236 PPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXP---LXAPXN 406
PP K+ G P P P S P AP P P G PP P + AP
Sbjct: 1050 PPVPKSSSGA-PSAPPPVPAPSSEIPSIPAPSGAP----PVPAPSGIPPVPKPSVAAPPV 1104
Query: 407 XNPXKGXXPRXPXGGSPXPP 466
P P G+P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVP 1124
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 290 PXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPP 466
P P P AP P P P P P AP P P G+P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPV-PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXPXXXXPPXXPP 766
P PPP PP P P PP PP
Sbjct: 1189 PPVPPPSEAPP---VPKPSVGVPPVPPP 1213
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 326 PPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPP 466
P A P P P P P AP P P G+P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 290 PXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P P S P P P PP PPP P AP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.95
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +2
Query: 326 PPAAPXXXPPPPXXXGPPPXPLXAP--XNXNPXKGXXPRXPXGGSPXPP 466
PP+ P PP PP P+ AP P P P G PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Frame = +2
Query: 290 PXPGSXXXXXXXPPAAPXXXPP--PPXXXGPPPXPLXAPXNXNPXKG--XXPRXPXGGSP 457
P P PP+ P PP P PP P AP G P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 458 XPPAXGP 478
PPA P
Sbjct: 476 PPPAPAP 482
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 698 PXXPPPPPXPPXPXXXXPPXXPP 766
P P PP PP PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 325 PPRXPLAXXPPPXSXRXXPXPPLXPXQPQP 414
PP P A PP PPL P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 25.8 bits (54), Expect = 8.9
Identities = 22/85 (25%), Positives = 23/85 (27%), Gaps = 4/85 (4%)
Frame = +2
Query: 236 PPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPP----AAPXXXPPPPXXXGPPPXPLXAPX 403
PP + RG P G S PP A PP PPP P AP
Sbjct: 315 PPPSRRNRGKPPI---GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 404 NXNPXKGXXPRXPXGGSPXPPAXGP 478
P PP P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 707 PPPPPXPPXPXXXXPPXXPP 766
PPP P P PP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPP 272
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 707 PPPPPXPPXPXXXXPP 754
PPPPP P PP
Sbjct: 311 PPPPPPPSRRNRGKPP 326
Score = 21.0 bits (42), Expect(2) = 8.4
Identities = 9/30 (30%), Positives = 9/30 (30%)
Frame = +2
Query: 854 PPXPPPPXPXXXXXXXXXXXXXXXXXPXPP 943
PP PPPP P PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 20.6 bits (41), Expect(2) = 6.5
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 854 PPXPPPP 874
PP PPPP
Sbjct: 311 PPPPPPP 317
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.24
Identities = 25/72 (34%), Positives = 25/72 (34%)
Frame = -1
Query: 465 GGXGDPPXGXRGXXPXXGLXLXGA*RGXGGGPXXXGGGGXXXGAAGGXXXXXXXXPGXGP 286
GG G PP G G G G G GG GG G G GG G G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG--FGGGPGGFEGGPGGFGGGPG---GFGG 249
Query: 285 PLXXXGXPPLGF 250
L G P GF
Sbjct: 250 GLGGFGGGPGGF 261
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -1
Query: 765 GGXXGGXXXXGXGGXGGGGGXXGGGXXG 682
GG GG G GG GGG G GGG G
Sbjct: 227 GGGPGGFEG-GPGGFGGGPGGFGGGLGG 253
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -1
Query: 765 GGXXGGXXXXGXGGXGGGGGXXGGGXXG 682
GG GG G GG GGG G GGG G
Sbjct: 241 GGGPGGFGG-GLGGFGGGPGGFGGGPGG 267
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = -1
Query: 465 GGXGDPPXGXRGXXPXXGLX---LXGA*RGXGGGPXXXGGGGXXXGAAG 328
GG G P G G G G G GGGP GGG G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -1
Query: 765 GGXXGGXXXXGXG--GXGGGGGXXGGGXXG 682
GG GG G G G GGG G GGG G
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.95
Identities = 20/64 (31%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +2
Query: 296 PGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXN-XNPXKG--XXPRXPXGGSPXPP 466
P S PP +P PP P P P L P P K P P P PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 467 AXGP 478
P
Sbjct: 200 KVPP 203
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/69 (27%), Positives = 21/69 (30%)
Frame = +2
Query: 236 PPXXKNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXNXNP 415
PP PR P P P S P P PPP P P AP +
Sbjct: 139 PPTSAPPRPSIPP-----PSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA 193
Query: 416 XKGXXPRXP 442
P+ P
Sbjct: 194 VPPMPPKVP 202
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 329 PAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGXXPRXPXGGSPXPPAXGP 478
P P PPPP P P + P G P SP P GP
Sbjct: 195 PPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNV-TSESPKFPNRGP 243
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +2
Query: 248 KNPRGGXPXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKGX 427
K+ P P P S P P PPP PP P AP P
Sbjct: 117 KSSASAAPPSAPAPPTPQSELRPPTSAPPRPSI--PPPSPASAPPIPSKAP--PIPSSLP 172
Query: 428 XPRXPXGGSPXPPA 469
P P PP+
Sbjct: 173 PPAQPAAPVKSPPS 186
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXP 736
P PP P PPP PP P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 413 GXGWXGXKGGX-GXXRXXMGGGXXARGXRGG 324
G G G +GG G R GG ARG RGG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 750 GXXXXGXGGXGGGGGXXGGGXXG 682
G G GG GG G GGG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGG 34
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 413 GXGWXGXKGGXGXXRXXMGGGXXARGXRGG 324
G G G +GG G GG + G RGG
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 765 GGXXGGXXXXGXGGXGGGGGXXGGGXXG 682
GG GG G GG GG G GG G
Sbjct: 37 GGGRGGARG-GRGGRGGARGGRGGSSGG 63
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 2.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 854 PPXPPPPXP 880
PP PPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 2.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 707 PPPPPXPPXP 736
P PPP PP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.0 bits (47), Expect(2) = 7.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 854 PPXPPPPXP 880
PP PPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 21.0 bits (42), Expect(2) = 7.7
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = +2
Query: 683 PXXPPPXXPPPPPXPPXPXXXXPPXXPP 766
P PP P P PP PP
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,558,202
Number of Sequences: 5004
Number of extensions: 22046
Number of successful extensions: 375
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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