BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_P03
(945 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 29 0.081
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 0.92
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 24 2.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 2.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 2.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 2.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 2.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 2.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 2.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 2.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 2.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 2.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 2.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.0
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 28.7 bits (61), Expect = 0.081
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 296 PGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXNXNP 415
PG P A PP P PP P AP + NP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 23.4 bits (48), Expect = 3.0
Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 3/28 (10%)
Frame = +2
Query: 692 PPPXXPPPPPX---PPXPXXXXPPXXPP 766
P P P P PP P PP PP
Sbjct: 25 PSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 23.0 bits (47), Expect = 4.0
Identities = 15/55 (27%), Positives = 17/55 (30%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 PXXXRGGPXPG---SXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAPXNXNPXKG 424
P GP P S P P PPP G PP + +P G
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASG 70
Score = 23.0 bits (47), Expect = 4.0
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2
Query: 386 PLXAPXNXNPXKGXXPRXPXGGSPXPPAXGP 478
P P P+ P GSP P+ GP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGP 46
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 692 PPPXXPPPPPXPPXP 736
P P PPPPP P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 329 PAAPXXXPPPPXXXGP 376
P P PPPP GP
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.6 bits (46), Expect(2) = 0.92
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 692 PPPXXPPPPP 721
PP PPPPP
Sbjct: 338 PPKPAPPPPP 347
Score = 22.2 bits (45), Expect = 7.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 695 PPXXPPPPPXP 727
PP PPPP P
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 7.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 698 PXXPPPPPXPP 730
P P PPP PP
Sbjct: 338 PPKPAPPPPPP 348
Score = 22.2 bits (45), Expect = 7.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 913 PPXXXPXPPPP 945
PP P PPPP
Sbjct: 338 PPKPAPPPPPP 348
Score = 20.6 bits (41), Expect(2) = 0.92
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +2
Query: 707 PPPPPXPPXPXXXXP 751
P P P PP P P
Sbjct: 339 PKPAPPPPPPSSSGP 353
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 108 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 150
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.8 bits (49), Expect = 2.3
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 378 GGPXXXGGGGXXXGAAGGXXXXXXXXPGXG 289
GGP GG GA+GG G G
Sbjct: 20 GGPGSSSAGGVVTGASGGSIVVGANNGGGG 49
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 356 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 398
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 341 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 383
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 269 PXXXRGGPXPGSXXXXXXXPPAAPXXXPPPPXXXGPPPXPLXAP 400
P G PGS P P PP PPP P P
Sbjct: 357 PWVPMRGQVPGSRHIGPLTP-FPPRFIPPDMYRLRPPPNPRFGP 399
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 707 PPPPPXPP 730
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,660
Number of Sequences: 438
Number of extensions: 6267
Number of successful extensions: 38
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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