Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_P02
         (1027 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q96NW7 Cluster: Leucine-rich repeat-containing protein ...    34   5.2  
UniRef50_Q16F81 Cluster: Diaphanous; n=3; Endopterygota|Rep: Dia...    34   6.8  

>UniRef50_Q96NW7 Cluster: Leucine-rich repeat-containing protein 7;
           n=41; Eumetazoa|Rep: Leucine-rich repeat-containing
           protein 7 - Homo sapiens (Human)
          Length = 1537

 Score = 34.3 bits (75), Expect = 5.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 637 RNPRCXXIPIHNPXXEPXHSPXTEGPPWNPWCXXTXIRAPF 759
           R  R   +P+        H+P TE PP NPW   T   +PF
Sbjct: 812 RQDRIVGVPLELEQSTHRHTPETEVPPSNPWQNWTRTPSPF 852


>UniRef50_Q16F81 Cluster: Diaphanous; n=3; Endopterygota|Rep:
            Diaphanous - Aedes aegypti (Yellowfever mosquito)
          Length = 1014

 Score = 33.9 bits (74), Expect = 6.8
 Identities = 15/40 (37%), Positives = 17/40 (42%)
 Frame = +1

Query: 907  PGXPGPXXXQXVQGFPXXPPXPXXGXXPPXIXXKXGSRPP 1026
            PG P P     + G P  PP P  G  PP +      RPP
Sbjct: 465  PGVPMPPPMPGMGGAPRPPPMPGMGPPPPPMPGMGPPRPP 504


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,222,077
Number of Sequences: 1657284
Number of extensions: 6331248
Number of successful extensions: 9652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9375
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 97980318480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)