Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_O24
(1308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1174 - 26696869-26698191 38 0.023
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 36 0.093
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.50
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.50
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.5
03_02_0765 + 11000724-11002496 30 3.5
07_03_1751 - 29215074-29216270 30 4.6
03_05_0510 + 25039408-25039455,25040627-25040641,25040832-250409... 30 4.6
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 29 6.1
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 8.1
05_03_0458 + 14280953-14281866,14281964-14282912 29 8.1
>12_02_1174 - 26696869-26698191
Length = 440
Score = 37.5 bits (83), Expect = 0.023
Identities = 32/111 (28%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Frame = -3
Query: 400 SPRAGXPXPXXXVXLPXVRPXRPXPPTLXQCXAXPSPXXXPPXSP*XTILLAXXXXHXPE 221
SP P V P V+P PPTL P P PP +P T + P
Sbjct: 189 SPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPP 248
Query: 220 RGXGGXPPKXXXVNASXXAPXPPA-XPXPXXXH--PPQSTNLKXNKXKPXP 77
P K V +P PP+ P P + P T + K KP P
Sbjct: 249 PPPRA-PVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPP 298
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 35.5 bits (78), Expect = 0.093
Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 3/90 (3%)
Frame = -3
Query: 397 PRAGXPXPXXXVXLPXV-RPXRPXPPTLXQCXAXPSPXXX-PPXSP*XTILLAXXXX-HX 227
PR G P P + RP P P C PSP PP T+ LA
Sbjct: 247 PRGGGAIPGLPAGFPFLLRPPPPLPVPGVICRPPPSPPYFAPPPRATPTVSLAGPPPGFN 306
Query: 226 PERGXGGXPPKXXXVNASXXAPXPPAXPXP 137
P+RG G + P PP P P
Sbjct: 307 PKRGLIGRGEAITLPESERPTPPPPPPPLP 336
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.50
Identities = 25/107 (23%), Positives = 30/107 (28%)
Frame = -3
Query: 397 PRAGXPXPXXXVXLPXVRPXRPXPPTLXQCXAXPSPXXXPPXSP*XTILLAXXXXHXPER 218
P P P +P P P PP L + P P PP P ++L P
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPN-RSVPPPPPPPPPLPNHSVLPPPPPPPPPPS 644
Query: 217 GXGGXPPKXXXVNASXXAPXPPAXPXPXXXHPPQSTNLKXNKXKPXP 77
P P PP P P T + P P
Sbjct: 645 LPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPP 691
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.50
Identities = 29/114 (25%), Positives = 35/114 (30%), Gaps = 2/114 (1%)
Frame = -3
Query: 400 SPRAGXPXPXXXVXLPXVRPXRPXPPTLXQCX-AXPSPXXXPPXSP*XTILLAXXXXHXP 224
+P A P + LP R P ++ A P+P PP P A P
Sbjct: 276 APAARPASPSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKP---AAAAPPPPPPP 332
Query: 223 ERGXGGXPPKXXXVNASXXAPXPPAXP-XPXXXHPPQSTNLKXNKXKPXPXXXA 65
+ PPK P PP P P PP K P P A
Sbjct: 333 KAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGA 386
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/98 (24%), Positives = 27/98 (27%)
Frame = -3
Query: 397 PRAGXPXPXXXVXLPXVRPXRPXPPTLXQCXAXPSPXXXPPXSP*XTILLAXXXXHXPER 218
P G P P + P P P PP Q P P P + P
Sbjct: 43 PPQGAPPPF--LAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYG 100
Query: 217 GXGGXPPKXXXVNASXXAPXPPAXPXPXXXHPPQSTNL 104
PP S PP P P PP+ L
Sbjct: 101 VNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQL 138
>03_02_0765 + 11000724-11002496
Length = 590
Score = 30.3 bits (65), Expect = 3.5
Identities = 28/93 (30%), Positives = 28/93 (30%)
Frame = +3
Query: 120 GGWXXXGXGXAGGXGAXXDAFTXXXLGGXPPXPRSGXXLXXXAXSMVXXGEXGGXXXGXG 299
GG G G GG G A LGG G L A G G G G
Sbjct: 429 GGGLGGGAGAGGGFGGGAGAGGGGGLGG---GAGGGGGLDGGAGGGAEAGGGFGGGAGAG 485
Query: 300 XAXHCXRVGGXGRXGRTXGSXTXXLGXGXPARG 398
GG G G G LG G A G
Sbjct: 486 TGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAGG 518
Score = 29.5 bits (63), Expect = 6.1
Identities = 29/95 (30%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Frame = +3
Query: 120 GGWXXXGXGXAGGXGAXXDAFTXXXLGGXPPXPRSGXXLXXXAXSMV--XXGEXGGXXXG 293
GG G G GG G A LGG G L A + G GG G
Sbjct: 309 GGGLGGGAGAGGGLGGGAGAGGGGGLGG---GAGGGGGLGGGAGGGLGGGAGAGGGLGGG 365
Query: 294 XGXAXHCXRVGGXGRXGRTXGSXTXXLGXGXPARG 398
G GG G G G LG G A G
Sbjct: 366 AGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGAGG 400
>07_03_1751 - 29215074-29216270
Length = 398
Score = 29.9 bits (64), Expect = 4.6
Identities = 26/93 (27%), Positives = 29/93 (31%)
Frame = +3
Query: 120 GGWXXXGXGXAGGXGAXXDAFTXXXLGGXPPXPRSGXXLXXXAXSMVXXGEXGGXXXGXG 299
GG G G GG G LGG +G + A + G GG G G
Sbjct: 116 GGGKGGGLGGGGGLGGGGGGGAGGGLGGG-AGGGAGAGVGGGAGAGGGAGGGGGLGGGAG 174
Query: 300 XAXHCXRVGGXGRXGRTXGSXTXXLGXGXPARG 398
GG G G G G G A G
Sbjct: 175 GGAGGGLGGGSGGGGGLGGGAGGGAGVGGGAGG 207
>03_05_0510 +
25039408-25039455,25040627-25040641,25040832-25040991,
25041116-25041192,25041324-25042528,25042537-25042621,
25043068-25043130,25043207-25043263,25043299-25043361,
25043560-25043643,25043730-25044320,25044535-25044663
Length = 858
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Frame = -3
Query: 343 PXRPXPPTLXQCXAXPS--PXXXPPXS--P*XTILLAXXXXHXPERGXGGXPPKXXXVNA 176
P P L + + PS P PP S P ++ + H RG PP NA
Sbjct: 715 PVASGPEQLPRSSSCPSIGPGGLPPSSRAPAEVVVASPLDEHVAFRGGFNTPPSASSTNA 774
Query: 175 SXXAPXPPAXPXP 137
+ A PP P P
Sbjct: 775 AAAAKLPP-LPSP 786
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -1
Query: 192 WXV*THLXPHXXPQPXPPPXSXTPXNQPI*XTTXSNLNPX*XP 64
W HL PH P P PPP P + +T + P P
Sbjct: 43 WIRRLHLLPHQPPPPPPPPPLPQPQHHHDAVSTDESRTPPPPP 85
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 226 PERGXGGXPPKXXXVNASXXAPXPPAXPXPXXXHPPQST 110
P G PP+ +AS AP P P P P ST
Sbjct: 67 PRPARAGFPPRCPLSHASTAAPFPTQPPFPSSLPLPSST 105
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 376 PXXXVXLPXVRPXRPX-PPTLXQCXAXPSPXXXPPXSP 266
P LP ++P P PPT C + P+P PP SP
Sbjct: 62 PSSPPPLPPLQPTPPPLPPTTLSCSSHPTP--PPPPSP 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,735,336
Number of Sequences: 37544
Number of extensions: 252381
Number of successful extensions: 1546
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4085517852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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