Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_O21
         (1126 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0066 + 14214512-14215146,14215848-14216139,14216264-14216281     31   1.3  
05_01_0494 - 4120996-4121011,4121152-4121483,4122560-4122706,412...    29   5.1  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    29   6.7  
09_02_0495 + 9880714-9881196                                           29   8.9  

>03_03_0066 + 14214512-14215146,14215848-14216139,14216264-14216281
          Length = 314

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 470 IHFFLXSLLSPEPQGTLRIPPGAPGL 393
           +H  L S   P P G  R+PPG PGL
Sbjct: 24  LHLSLRSYRPPSPGGGRRLPPGPPGL 49


>05_01_0494 -
           4120996-4121011,4121152-4121483,4122560-4122706,
           4122818-4122871,4123203-4123367,4125516-4125827,
           4125992-4126078,4126202-4126411
          Length = 440

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -1

Query: 304 HPWGFRGSQAALGSWPSKSPSHPGAGKDRKELG 206
           H W   GS A +G WPS   SH GA  D  + G
Sbjct: 331 HWWLQLGSGALVGYWPSFLFSHLGARADMAQFG 363


>01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,
            3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 10/65 (15%)
 Frame = -3

Query: 1118 GGGXGKXPPXXX---PXPAFS---PGGXGRIP----FXAXXKPXPNTFPPGTLETLKXEG 969
            GGG G  PP      P P +S   PGG G +P         +P P    PG        G
Sbjct: 344  GGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGG 403

Query: 968  XXGGG 954
              GGG
Sbjct: 404  GGGGG 408


>09_02_0495 + 9880714-9881196
          Length = 160

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
 Frame = +1

Query: 952  YPPPXXPSXFNVSRVPGGKVXGXGXFXALXGIRPXPPGEKAGX-GXXXGGXF---PXPPP 1119
            YPPP      + S   GG     G F       P PPG   G      GG F   P PPP
Sbjct: 50   YPPPPPAGSSSSSSSGGGDGGAGGLFGGTYP--PPPPGVMPGAFAPPFGGGFPYGPAPPP 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,566,699
Number of Sequences: 37544
Number of extensions: 419664
Number of successful extensions: 896
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3398064036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)