Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_O19
(867 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.040
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.053
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.28
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.37
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.37
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.5
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.6
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 26 6.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.040
Identities = 24/97 (24%), Positives = 26/97 (26%)
Frame = +2
Query: 425 PXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPPP 604
P P P S P P P PS P PS P + P PP
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 605 PXXXXXXPPXXPXXXXXPXXPXXXXSXPXXXPPXXPP 715
P PP P P + P P P
Sbjct: 1194 P---SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Score = 29.5 bits (63), Expect = 0.65
Identities = 23/97 (23%), Positives = 24/97 (24%)
Frame = +2
Query: 425 PXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPPP 604
P P P S P P P PS P PS P PP
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP---VPKPSVAAPPV 1171
Query: 605 PXXXXXXPPXXPXXXXXPXXPXXXXSXPXXXPPXXPP 715
P PP P P + P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP 1208
Score = 29.1 bits (62), Expect = 0.86
Identities = 27/128 (21%), Positives = 29/128 (22%), Gaps = 2/128 (1%)
Frame = +1
Query: 487 PXPPXXXPXXXSXTXXXXXPLXSXXXPXXSXXXXXPP-PPPXXXXPPPPXXPXXXXXXXX 663
P P P P S P PP P P PP P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 664 SXXXXXPPXXXXXXXXP-PXXXXXXXXXGXRXXXXXXXXXSXXPXXPPXPXXXPXXPPXL 840
S P P P + P PP P P +
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV 1205
Query: 841 XPPPXPPP 864
PP PPP
Sbjct: 1206 GVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/103 (22%), Positives = 24/103 (23%), Gaps = 5/103 (4%)
Frame = +2
Query: 422 PPXPXXRXPAXXXSXXXXXXXPPPPPX-----PXPXPSXXXPXXXXPSXXXPXLXXLXXX 586
PP P PP P P P PS P PS P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 587 XXPPPPPXXXXXXPPXXPXXXXXPXXPXXXXSXPXXXPPXXPP 715
P PP P P + P P PP
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/97 (20%), Positives = 23/97 (23%)
Frame = +2
Query: 425 PXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPPP 604
P P P S PP P PS P P + + PP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 605 PXXXXXXPPXXPXXXXXPXXPXXXXSXPXXXPPXXPP 715
P P P P + P P P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 27.1 bits (57), Expect = 3.5
Identities = 27/135 (20%), Positives = 31/135 (22%), Gaps = 8/135 (5%)
Frame = +1
Query: 487 PXPPXXXPXXXSXTXXXXXPLXSXXXPXXSXXXXXPP-PPPXXXXPP-------PPXXPX 642
P P P + + P S P PP P P PP PP
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 643 XXXXXXXSXXXXXPPXXXXXXXXPPXXXXXXXXXGXRXXXXXXXXXSXXPXXPPXPXXXP 822
PP PP + + PP P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
Query: 823 XXPPXLXPPPXPPPP 867
PP P PP P
Sbjct: 1187 GVPPVPPPSEAPPVP 1201
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = +2
Query: 425 PXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXP 562
P P P S PP P P PS P P+ P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.053
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 781 SXXPXXPPXPXXXPXXPPXLXPPPXPPP 864
S P PP P P P PPP PPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 799 PPXPXXXPXXPPXLXPPPXPPPP 867
PP P PP PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +2
Query: 485 PPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPPPPXXXXXXPPXXP 640
PPPPP P+ P P + PPPPP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVP----PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 790 PXXPPXPXXXPXXPPXLXPPPXPPPP 867
P P P P P + PP PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 799 PPXPXXXPXXPPXLXPPPXPPPP 867
PP P P PPP PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +2
Query: 422 PPXPXXRXPAXXXSXXXXXXXPPPPPXPXP 511
PP P P PPPP P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 485 PPPPPXPXPXPS 520
PPPPP P P S
Sbjct: 775 PPPPPPPPPAVS 786
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.37
Identities = 20/79 (25%), Positives = 21/79 (26%)
Frame = +2
Query: 422 PPXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPP 601
PP P + PP P P PS P PS P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP---IPSSLPPPAQPAAPVKSPPS 186
Query: 602 PPXXXXXXPPXXPXXXXXP 658
P PP P P
Sbjct: 187 APSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 790 PXXPPXPXXXPXXPPXLXPPPXPPPP 867
P P P P PP + PPP P
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 799 PPXPXXXPXXPPXLXPPPXPPPP 867
PP P P P L PP P P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAP 180
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.3 bits (65), Expect = 0.37
Identities = 25/99 (25%), Positives = 25/99 (25%), Gaps = 1/99 (1%)
Frame = +2
Query: 422 PPXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPP- 598
PP P A PPPP P PS P L PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS--------TGRQPPPLSSSRAVSNPPA 390
Query: 599 PPPXXXXXXPPXXPXXXXXPXXPXXXXSXPXXXPPXXPP 715
PPP P P P PP PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 790 PXXPPXPXXXPXXPPXLXPPPXPPP 864
P PP P P PP P PPP
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.9 bits (59), Expect = 2.0
Identities = 32/140 (22%), Positives = 34/140 (24%), Gaps = 4/140 (2%)
Frame = +2
Query: 308 AGGXPXPPXXXXXPPXPXXXXXXXXXXXXXXXXXXXXX--PPXPXXRXPAXXXSXXXXXX 481
AG P PP PP P PP P P
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA------- 400
Query: 482 XPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPPPPXXXXXXPPXXPXXXXXPX 661
P PP + P PS P PP P PP P P
Sbjct: 401 -PALPPLGNASRTSTPPVPTPPSLP-PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 662 XPXXXXSXPXXXP--PXXPP 715
P + P P P PP
Sbjct: 459 LPAGMPAAPPLPPAAPAPPP 478
Score = 26.2 bits (55), Expect = 6.0
Identities = 26/101 (25%), Positives = 27/101 (26%)
Frame = +2
Query: 422 PPXPXXRXPAXXXSXXXXXXXPPPPPXPXPXPSXXXPXXXXPSXXXPXLXXLXXXXXPPP 601
PP P + PPPPP P P S PPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSS----------NSSLPPP 339
Query: 602 PPXXXXXXPPXXPXXXXXPXXPXXXXSXPXXXPPXXPPXXG 724
PP PP P P S P PP P G
Sbjct: 340 PP------PPRSNAAGSIP-LPPQGRSAPPPPPPRSAPSTG 373
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 790 PXXPPXPXXXPXXPPXLXPPPXPP 861
P PP P P PP P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 595 PPPPXXXXPPPPXXP 639
PPPP PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAP 1721
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 592 PPPPPXXXXPPPPXXP 639
PPPPP PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPP 1722
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +1
Query: 790 PXXPPXPXXXPXXP--PXLX--PPPXPPPP 867
P PP P P P P + PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +2
Query: 485 PPPPPXPXPXPSXXXPXXXXPSXXXP 562
PPPPP P P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPP 1732
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 799 PPXPXXXPXXPPXLXPPPXPPPP 867
P P P PPP PPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPPP 1102
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 3 PXF*LPTSLIRGNSFKELKWWWLSL 77
P + P +LI S+KE WW L +
Sbjct: 195 PVYMAPETLIHAVSYKESDWWSLGI 219
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/48 (27%), Positives = 14/48 (29%)
Frame = +1
Query: 487 PXPPXXXPXXXSXTXXXXXPLXSXXXPXXSXXXXXPPPPPXXXXPPPP 630
P PP T P+ S PPPP PP P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,550,649
Number of Sequences: 5004
Number of extensions: 23008
Number of successful extensions: 268
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -