Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_O16
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 205 4e-53
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 188 6e-48
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 34 0.12
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 33 0.38
11_01_0801 - 7071455-7071847 29 3.5
01_02_0013 + 10162478-10163581 29 3.5
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 6.1
01_01_1134 + 8994315-8995892 28 8.1
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 205 bits (500), Expect = 4e-53
Identities = 109/203 (53%), Positives = 134/203 (66%), Gaps = 9/203 (4%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECST 305
GGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE T
Sbjct: 15 GGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALRLDTGNYSWGSEAVT 74
Query: 306 RKTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKK-------- 461
RKTRI+DVVYNASNNELVRT+TL ++AIV VDA PF+QWY +HY + +GRKK
Sbjct: 75 RKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKD 134
Query: 462 GAKLTEAEEAIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRA 641
A+ E E A K+S RK R + + +G PGQCGRA
Sbjct: 135 AAEGQEGEAATEEAKKSNHVVRKLEKRQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRA 194
Query: 642 DGYILKGKELEFYLRKIKSKRAK 710
DGYIL+GKELEFY++K++ K+ K
Sbjct: 195 DGYILEGKELEFYMKKLQRKKGK 217
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD HKRRATG
Sbjct: 1 MGISRDSMHKRRATG 15
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 188 bits (457), Expect = 6e-48
Identities = 109/220 (49%), Positives = 133/220 (60%), Gaps = 26/220 (11%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECST 305
GGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE T
Sbjct: 15 GGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVT 74
Query: 306 RKTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGR-------KKG 464
RKTRI+DVVYNASNNELVRT+TL ++AIV VDA PF+QWY +HY + +GR KK
Sbjct: 75 RKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKD 134
Query: 465 A------------------KLTEAEEAIINKKRSPKTARKYLGRATSC*G*GCSKXAXHT 590
A K +AE K+S RK R + +
Sbjct: 135 AEHALGKIRCLFIGLYVMLKGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGS 194
Query: 591 GAFAGLRGESPGQCGRADGYILKGKELEFYLRKIKSKRAK 710
G PGQCGRADGYIL+GKELEFY++K++ K+ K
Sbjct: 195 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 234
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD HKRRATG
Sbjct: 1 MGISRDSMHKRRATG 15
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 213 IHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLGQNAIV 392
+H + + GG T R +R + C +++ ++V++ + NELV T QN I+
Sbjct: 376 LHGLLASGGGTADRCIRFWNTTTNMHLNCVDTGSQVCNLVWSKNVNELVSTHGYSQNQII 435
Query: 393 V 395
V
Sbjct: 436 V 436
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 159 RKYELGRPAANTRLGPQRIHSVRSR----GGNTKYRALRLDTGN-FSWGS 293
R+ +LG P+ +T+ P+R+ S+++R K+ A DTG F+WGS
Sbjct: 271 REGQLGYPSVDTQPTPRRVSSLKARIISVAAANKHSAAVADTGEVFTWGS 320
>11_01_0801 - 7071455-7071847
Length = 130
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 673 SSSLPFKM*PSARPH*P---GDSPRKPANAPVXIAXLEHPQP 557
S+S F+ P+ RP P DSP +PA P L HPQP
Sbjct: 30 SASALFQGAPARRPPPPRFGADSPLRPAPPPRRRLGLPHPQP 71
>01_02_0013 + 10162478-10163581
Length = 367
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 238 EILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQRPL 375
E +S RC P+ G R + A SL + ++HL +C RPL
Sbjct: 240 EYMSPERCA--PMAMAGARVARAADVWSLGITVLHLYQGYCPARPL 283
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 196 GSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMN 354
G + P + VV + + C+W + SLG R Q++K + L ++ + +N
Sbjct: 270 GHQMVTINPLLSVVAA-TVIPCMWLVIASLGRRLRQISKEAHISLAMLTVYLN 321
>01_01_1134 + 8994315-8995892
Length = 525
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 273 GNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFR 416
G FS C+ RK +DV + RT +N+ VV D+T F+
Sbjct: 146 GLFSRDCPCAGRKAVTVDVASEPRSPATPRTHARFENSHVVADSTIFK 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,582,819
Number of Sequences: 37544
Number of extensions: 457145
Number of successful extensions: 1255
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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