Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_O16
(844 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 286 8e-77
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 286 8e-77
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 286 8e-77
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 286 8e-77
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 225 1e-58
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 77 6e-14
AF229126-5|AAF43197.1| 421|Homo sapiens acetylcholinesterase co... 31 5.2
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 286 bits (701), Expect = 8e-77
Identities = 134/194 (69%), Positives = 152/194 (78%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 308
GGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 15 GGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 309 KTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 488
KTRIIDVVYNASNNELVRTKTL +N IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 489 AIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGYILKGKE 668
I+NKKRS K +KY R + + G PGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 669 LEFYLRKIKSKRAK 710
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 34.3 bits (75), Expect = 0.56
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 286 bits (701), Expect = 8e-77
Identities = 134/194 (69%), Positives = 152/194 (78%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 308
GGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 15 GGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 309 KTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 488
KTRIIDVVYNASNNELVRTKTL +N IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 489 AIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGYILKGKE 668
I+NKKRS K +KY R + + G PGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 669 LEFYLRKIKSKRAK 710
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 34.3 bits (75), Expect = 0.56
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 286 bits (701), Expect = 8e-77
Identities = 134/194 (69%), Positives = 152/194 (78%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 308
GGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 15 GGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 309 KTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 488
KTRIIDVVYNASNNELVRTKTL +N IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 489 AIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGYILKGKE 668
I+NKKRS K +KY R + + G PGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 669 LEFYLRKIKSKRAK 710
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 34.3 bits (75), Expect = 0.56
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 286 bits (701), Expect = 8e-77
Identities = 134/194 (69%), Positives = 152/194 (78%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 308
GGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 15 GGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 309 KTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 488
KTRIIDVVYNASNNELVRTKTL +N IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 489 AIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGYILKGKE 668
I+NKKRS K +KY R + + G PGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 669 LEFYLRKIKSKRAK 710
LEFYLRKIK+++ K
Sbjct: 195 LEFYLRKIKARKGK 208
Score = 34.3 bits (75), Expect = 0.56
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 225 bits (551), Expect = 1e-58
Identities = 117/194 (60%), Positives = 135/194 (69%)
Frame = +3
Query: 129 GGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 308
GGKR P KKRKYELGRPAANT++GP+RIH+VR RGG C TR
Sbjct: 15 GGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TR 54
Query: 309 KTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 488
KTRIIDVVYNASNNELVRTKTL +N IV++D+TP+RQWYESHY LPLGRKKGAKLT EE
Sbjct: 55 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 114
Query: 489 AIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGYILKGKE 668
I+NKKRS K +KY R + + G PGQCGRADGY+L+GKE
Sbjct: 115 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 174
Query: 669 LEFYLRKIKSKRAK 710
LEFYLRKIK+++ K
Sbjct: 175 LEFYLRKIKARKGK 188
Score = 34.3 bits (75), Expect = 0.56
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 77.4 bits (182), Expect = 6e-14
Identities = 39/80 (48%), Positives = 48/80 (60%)
Frame = +3
Query: 471 LTEAEEAIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGY 650
LT EE I+NKKRS K +KY R + + G PGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 651 ILKGKELEFYLRKIKSKRAK 710
+L+GKELEFYLRKIK+++ K
Sbjct: 61 VLEGKELEFYLRKIKARKGK 80
>AF229126-5|AAF43197.1| 421|Homo sapiens acetylcholinesterase
collagen-like tail subunit isoform III protein.
Length = 421
Score = 31.1 bits (67), Expect = 5.2
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 108 GISEGPPG--GKRAPIRKKRKYELGRPAANTRLGP 206
G S GPPG GK P K K ELGRP R GP
Sbjct: 70 GRSPGPPGLPGKTGP--KGEKGELGRPGRKGRPGP 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,070,878
Number of Sequences: 237096
Number of extensions: 2584215
Number of successful extensions: 5220
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5208
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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