Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_O16
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 246 2e-65
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 31 0.78
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 31 0.78
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 31 0.78
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 31 0.78
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 31 0.78
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 31 0.78
U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing facto... 31 1.4
U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing facto... 31 1.4
U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor... 31 1.4
U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein. 31 1.4
Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical pr... 28 9.5
L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin fam... 28 9.5
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 9.5
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 9.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 9.5
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 28 9.5
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 28 9.5
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 28 9.5
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 28 9.5
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 28 9.5
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 246 bits (601), Expect = 2e-65
Identities = 118/194 (60%), Positives = 145/194 (74%), Gaps = 1/194 (0%)
Frame = +3
Query: 132 GKRAPI-RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 308
G P+ KKRK+ELGRPAANT++G R+ VR+RGGN KYRALRLD+GNFSW SE +TR
Sbjct: 15 GATQPVPHKKRKFELGRPAANTKIGAHRVRLVRTRGGNEKYRALRLDSGNFSWASEQTTR 74
Query: 309 KTRIIDVVYNASNNELVRTKTLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 488
KTRI+D +YNA+NNELVRTKTL + AI+ VDA PFRQWYE+HY LPL RKK AKL+E +
Sbjct: 75 KTRIVDTMYNATNNELVRTKTLVKGAIISVDAAPFRQWYEAHYALPLARKKNAKLSEEDN 134
Query: 489 AIINKKRSPKTARKYLGRATSC*G*GCSKXAXHTGAFAGLRGESPGQCGRADGYILKGKE 668
AI+NKKRS T +KY R + +TG SPGQ G+A+GYIL+GKE
Sbjct: 135 AILNKKRSHHTMKKYTERQKTAAVDALLIEQFNTGRLLARISSSPGQVGQANGYILEGKE 194
Query: 669 LEFYLRKIKSKRAK 710
L+FYLRKI++K+AK
Sbjct: 195 LDFYLRKIRAKKAK 208
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2
Query: 86 MGISRDHWHKRRATG 130
MGISRD WHKR TG
Sbjct: 1 MGISRDSWHKRYKTG 15
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 359
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 359
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 359
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 359
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 359
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 31.5 bits (68), Expect = 0.78
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 255 ALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 359
A+++D G+F+WGS+ RK + D+ +N +LV
Sbjct: 613 AIKMDGGSFAWGSKEEDRK--LHDITFNIKRGQLV 645
>U32305-11|AAL50323.1| 663|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
b protein.
Length = 663
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -1
Query: 235 PRERTEWIR*GPSLVFAAGRPNSYFLFLRMGARFPPGGPSLMPVIPTNTHLSWVKKENTR 56
PR+ + + R P L AG ++ F + FPP P PVIP +T + +KE R
Sbjct: 456 PRDESSF-RFDPDLDETAGPSDTTANFSDISGLFPPPTP---PVIPPSTQMQVDRKEKAR 511
Query: 55 LLKSNL 38
+ L
Sbjct: 512 IFMEKL 517
>U32305-10|AAM75378.1| 749|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
a protein.
Length = 749
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -1
Query: 235 PRERTEWIR*GPSLVFAAGRPNSYFLFLRMGARFPPGGPSLMPVIPTNTHLSWVKKENTR 56
PR+ + + R P L AG ++ F + FPP P PVIP +T + +KE R
Sbjct: 542 PRDESSF-RFDPDLDETAGPSDTTANFSDISGLFPPPTP---PVIPPSTQMQVDRKEKAR 597
Query: 55 LLKSNL 38
+ L
Sbjct: 598 IFMEKL 603
>U32305-9|AAM75380.1| 751|Caenorhabditis elegans Splicing factor
(suppressor ofwhite apricot) related protein 1, isoform
d protein.
Length = 751
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -1
Query: 235 PRERTEWIR*GPSLVFAAGRPNSYFLFLRMGARFPPGGPSLMPVIPTNTHLSWVKKENTR 56
PR+ + + R P L AG ++ F + FPP P PVIP +T + +KE R
Sbjct: 544 PRDESSF-RFDPDLDETAGPSDTTANFSDISGLFPPPTP---PVIPPSTQMQVDRKEKAR 599
Query: 55 LLKSNL 38
+ L
Sbjct: 600 IFMEKL 605
>U06932-1|AAA64937.1| 749|Caenorhabditis elegans CeSWAP protein.
Length = 749
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = -1
Query: 235 PRERTEWIR*GPSLVFAAGRPNSYFLFLRMGARFPPGGPSLMPVIPTNTHLSWVKKENTR 56
PR+ + + R P L AG ++ F + FPP P PVIP +T + +KE R
Sbjct: 542 PRDESSF-RFDPDLDETAGPSDTTANFSDISGLFPPPTP---PVIPPSTQMQVDRKEKAR 597
Query: 55 LLKSNL 38
+ L
Sbjct: 598 IFMEKL 603
>Z81472-1|CAB03889.1| 173|Caenorhabditis elegans Hypothetical
protein C16D6.1 protein.
Length = 173
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -1
Query: 241 FPP-RERTEWIR*GPSLVFAAGRPNSYFLFLRMGARFPPGGPSLMP 107
+PP R T W GP G P + L +PPG P MP
Sbjct: 55 YPPYRHNTMWFNGGPPGPPPHGPPPPHLLHALPHPAYPPGHPLHMP 100
>L14745-8|AAA27923.1| 244|Caenorhabditis elegans Tetraspanin family
protein 1 protein.
Length = 244
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -1
Query: 358 TNSLLDALYTTSMIRVLRV 302
TNSL+DA+YTT+ + L++
Sbjct: 133 TNSLIDAMYTTNSVNDLKI 151
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/64 (26%), Positives = 24/64 (37%)
Frame = +3
Query: 369 TLGQNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSPKTARKYLGRAT 548
T+ A + TPF +WY L + + AII K + Y RA
Sbjct: 1151 TIKMAATISGHPTPFLEWYFGEEKLQVSQNVSMYYEAGTSAIILKNVQKRQGGNYFLRAH 1210
Query: 549 SC*G 560
+C G
Sbjct: 1211 NCHG 1214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,830,858
Number of Sequences: 27780
Number of extensions: 373295
Number of successful extensions: 1089
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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