Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_O05
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           30   2.2  
03_06_0471 + 34169562-34169892,34170121-34170347                       29   5.1  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    28   8.9  
05_05_0153 - 22766805-22767023,22767662-22767940,22768294-227684...    28   8.9  

>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = +3

Query: 135 PTLKTPVRVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQG 305
           P+   P    +  +    Y P  + P  V PP  Y P  +G  P     N + Y + P G
Sbjct: 376 PSTPLPPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVG 434

Query: 306 RPYFKPTP 329
           RP   P P
Sbjct: 435 RPNSGPPP 442


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +3

Query: 189 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFP 335
           Y P    P    PP  Y P+  GY P   GAY       +P + P  +P
Sbjct: 56  YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYP 101


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +3

Query: 180 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 332
           G  Y+P   R     PP+   P    Y P   G  Y  +PQG+PY  P P+
Sbjct: 247 GETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291


>05_05_0153 -
           22766805-22767023,22767662-22767940,22768294-22768401,
           22768500-22768779,22768871-22769174,22769367-22769975,
           22770186-22770411
          Length = 674

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 106 HEEFHFYMITSYHRRKY*SCQNLKEFPIV 20
           HEE+  + +  +HR+     +  KEFPIV
Sbjct: 364 HEEYEVFELRIFHRKNRTGFEENKEFPIV 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,473,298
Number of Sequences: 37544
Number of extensions: 344723
Number of successful extensions: 884
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)