Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_O05
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   2.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   8.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   8.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.9  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 278  CILRGPSPRPTLLQAYPLS-LVLAVGSKEYL 367
            C+LR  +P P +L+A   S  VL V ++ +L
Sbjct: 1106 CVLRASTPAPVVLEAVHASRRVLIVLTRNFL 1136


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 307 DLTSSLPPFPGARGGK 354
           DL   LPP P  RGG+
Sbjct: 370 DLDEPLPPPPPIRGGE 385


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 418 YEILKYIVNTLFRYKFSKIFFTSHRE 341
           YE+ +Y+   + R+K ++I    H E
Sbjct: 50  YEVFRYLELAMIRWKDTEIGLFLHEE 75


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 199 LTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 309
           +TT  T+     TTT   T  N +     T   P+ D
Sbjct: 658 ITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQVD 694


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,032
Number of Sequences: 438
Number of extensions: 4193
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)