Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_O04
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14331-3|AAA28096.1|  180|Caenorhabditis elegans Hypothetical pr...   143   1e-34
AC084161-2|AAK29732.3|  782|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical pr...    29   5.5  

>L14331-3|AAA28096.1|  180|Caenorhabditis elegans Hypothetical
           protein K12H4.4 protein.
          Length = 180

 Score =  143 bits (347), Expect = 1e-34
 Identities = 68/147 (46%), Positives = 91/147 (61%)
 Frame = +3

Query: 243 VDYRTGAQMNTVKVVVKNVPDYGASRERNDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAE 422
           +DY    ++    V V+NV DY    ++ DL  L F+LK D S +FNWNVKQLF+YL AE
Sbjct: 33  LDYTVPTKLTVNDVKVRNVVDYATDEQQADLATLNFNLKVDFSKIFNWNVKQLFVYLVAE 92

Query: 423 YITPSNELNQVVLWDKIILRGENAVLDFKNMNTKYYFWDDGNGLKGHSXVTLTLSWNIIP 602
           Y +  NE+NQVVLWD+I+ R +  V+D   + +KYYF DDG  L  H  VT  L +N+IP
Sbjct: 93  YKSKVNEVNQVVLWDRIVERADRVVMDEIGVKSKYYFLDDGTNLLNHKNVTFVLRYNVIP 152

Query: 603 NAGLLPNIXASWSTLPSKFPIXYTPTR 683
           N+G L  + +S   +   FP  YT TR
Sbjct: 153 NSGYLRLVQSS-DQVVVPFPTTYTTTR 178



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = +2

Query: 146 MYSVLTRGNAILTYTLSVLACLTFLCFLSTL 238
           M+++L+R NA+L +TL V+A +T  CFLST+
Sbjct: 1   MHNLLSRANALLAFTLWVMAAVTAACFLSTV 31


>AC084161-2|AAK29732.3|  782|Caenorhabditis elegans Hypothetical
           protein Y92H12A.4 protein.
          Length = 782

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 27/86 (31%), Positives = 44/86 (51%)
 Frame = +3

Query: 366 LSNLFNWNVKQLFLYLTAEYITPSNELNQVVLWDKIILRGENAVLDFKNMNTKYYFWDDG 545
           +SNL  +  KQ  L    +++  S EL + V +  ++  G+N +  F  +N K++  +DG
Sbjct: 262 VSNLEEYMTKQNVL----QHVRISIELERKVQF-MVVNGGKNLLTYFTWLNNKFFRANDG 316

Query: 546 NGLKGHSXVTLTLSWNIIPNAGLLPN 623
             L+    V   LS N+ P A  LPN
Sbjct: 317 PALRA-ECVRYVLSMNLDP-AKALPN 340


>Z22177-1|CAA80151.1|  578|Caenorhabditis elegans Hypothetical
           protein ZK512.2 protein.
          Length = 578

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 332 IISFPRCSVVRYVFNYYFNCIHLGPSSVVH 243
           +I FP C+ VRY +  +  C+   P   VH
Sbjct: 261 LIFFPSCNSVRYFYKIFERCLGKRPLFAVH 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,322,703
Number of Sequences: 27780
Number of extensions: 315756
Number of successful extensions: 707
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)