Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_O03
         (1015 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06505-1|AAA36157.1|  165|Homo sapiens ribosomal protein L12 pro...    48   7e-05
BC105603-1|AAI05604.1|  165|Homo sapiens ribosomal protein L12 p...    48   7e-05
BC094831-1|AAH94831.1|  165|Homo sapiens ribosomal protein L12 p...    48   7e-05
BC050644-1|AAH50644.1|  165|Homo sapiens ribosomal protein L12 p...    48   7e-05
AL445222-15|CAH72929.1|  165|Homo sapiens ribosomal protein L12 ...    48   7e-05
AB209471-1|BAD92708.1|  197|Homo sapiens ribosomal protein L12 v...    46   2e-04
AL021366-3|CAA16156.1|  165|Homo sapiens cICK0721Q.2 (60S Riboso...    46   3e-04
BC059950-1|AAH59950.1|  132|Homo sapiens RPL12 protein protein.        40   0.011

>L06505-1|AAA36157.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 47.6 bits (108), Expect = 7e-05
 Identities = 33/110 (30%), Positives = 54/110 (49%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  +Q +  QI VVPS  AL  ++     P +R        +GNI+ +  +  
Sbjct: 54  KGLRITVKLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNI 112

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 113 ARQ-MRHRSLARELSGTIKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 160


>BC105603-1|AAI05604.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 47.6 bits (108), Expect = 7e-05
 Identities = 33/110 (30%), Positives = 54/110 (49%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  +Q +  QI VVPS  AL  ++     P +R        +GNI+ +  +  
Sbjct: 54  KGLRITVKLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNI 112

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 113 ARQ-MRHRSLARELSGTIKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 160


>BC094831-1|AAH94831.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 47.6 bits (108), Expect = 7e-05
 Identities = 33/110 (30%), Positives = 54/110 (49%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  +Q +  QI VVPS  AL  ++     P +R        +GNI+ +  +  
Sbjct: 54  KGLRITVKLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNI 112

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 113 ARQ-MRHRSLARELSGTIKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 160


>BC050644-1|AAH50644.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 47.6 bits (108), Expect = 7e-05
 Identities = 33/110 (30%), Positives = 54/110 (49%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  +Q +  QI VVPS  AL  ++     P +R        +GNI+ +  +  
Sbjct: 54  KGLRITVKLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNI 112

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 113 ARQ-MRHRSLARELSGTIKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 160


>AL445222-15|CAH72929.1|  165|Homo sapiens ribosomal protein L12
           protein.
          Length = 165

 Score = 47.6 bits (108), Expect = 7e-05
 Identities = 33/110 (30%), Positives = 54/110 (49%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  +Q +  QI VVPS  AL  ++     P +R        +GNI+ +  +  
Sbjct: 54  KGLRITVKLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNI 112

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 113 ARQ-MRHRSLARELSGTIKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 160


>AB209471-1|BAD92708.1|  197|Homo sapiens ribosomal protein L12
           variant protein.
          Length = 197

 Score = 46.4 bits (105), Expect = 2e-04
 Identities = 33/110 (30%), Positives = 54/110 (49%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  +Q +  QI VVPS  AL  ++     P +R        +GNI+ +  +  
Sbjct: 86  KGLRITVKLTIQNRQAQIEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNI 144

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 145 VRQ-MRHRSLARELSGTIKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 192


>AL021366-3|CAA16156.1|  165|Homo sapiens cICK0721Q.2 (60S Ribosomal
           Protein L12 LIKE protein) protein.
          Length = 165

 Score = 45.6 bits (103), Expect = 3e-04
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
 Frame = +2

Query: 449 KXXKIXXQXXVQXKXPQIXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRX 628
           K  +I  +  ++ +  QI VVPS  A   ++     P +R        NGNI+ +  +  
Sbjct: 54  KGLRITVKLTIENRQAQIEVVPSASAPIIKAL-KKPPRDRKKQKNIKHNGNITFDEIVNI 112

Query: 629 GKNHXKQINGPVTFPGSVKXXSWPSTV-SLDVLVEGRPPHDLIDDINSGAL 778
            +   +  +      G++K    P T  S+   V+G  PHD+IDDINSGA+
Sbjct: 113 ARQ-MRHRSLARELSGTIKEI--PGTAQSMGCNVDGHHPHDIIDDINSGAV 160


>BC059950-1|AAH59950.1|  132|Homo sapiens RPL12 protein protein.
          Length = 132

 Score = 40.3 bits (90), Expect = 0.011
 Identities = 29/93 (31%), Positives = 46/93 (49%)
 Frame = +2

Query: 500 IXVVPSXXALXXQSP*GASPXNRXXXXXXXXNGNISLEXCIRXGKNHXKQINGPVTFPGS 679
           I VVPS  AL  ++     P +R        +GNI+ +  +   +   +  +      G+
Sbjct: 38  IEVVPSASALIIKAL-KEPPRDRKKQKNIKHSGNITFDEIVNIARQ-MRHRSLARELSGT 95

Query: 680 VKXXSWPSTVSLDVLVEGRPPHDLIDDINSGAL 778
           +K     +  S+   V+GR PHD+IDDINSGA+
Sbjct: 96  IKEILGTAQ-SVGCNVDGRHPHDIIDDINSGAV 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,633,173
Number of Sequences: 237096
Number of extensions: 1812935
Number of successful extensions: 5967
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5959
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13599698196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)