BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_N23
(923 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.0
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.9
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 5.2
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 5.2
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 5.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.8
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.8
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.8
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.8
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.8
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.8
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.8
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 726 RXXXPPPPPLPP 761
R PPPPP PP
Sbjct: 1351 RQQQPPPPPPPP 1362
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 214 EEFPPGLRSSADRAESQHQREDEAQNT 134
+EFP S +R S HQR + NT
Sbjct: 102 KEFPNSSSSDDERPNSIHQRASFSLNT 128
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 5.2
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 375 IHN-YLQYCFKLNASLVLYHEVYFPKDF 295
+HN + CF NA V +HE+ P +
Sbjct: 84 LHNIWRPDCFFKNAKKVTFHEMSIPNHY 111
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 22.6 bits (46), Expect = 5.2
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 713 GGPGGXGGXXXGXXXXXXXXGGGG 642
G PGG GG G GGG
Sbjct: 145 GSPGGNGGPRNGLLPLLVWIYGGG 168
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.6 bits (46), Expect = 5.2
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 713 GGPGGXGGXXXGXXXXXXXXGGGG 642
G PGG GG G GGG
Sbjct: 145 GSPGGNGGPRNGLLPLLVWIYGGG 168
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 127 PFPPRFIPPDMYRLRPPPNPRFGP 150
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 375 PFPPRFIPPDMYRLRPPPNPRFGP 398
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 360 PFPPRFIPPDMYRLRPPPNPRFGP 383
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 692 PXXPXXXPPXXXGXXPPPPPXTXP 763
P P PP PPP P P
Sbjct: 376 PFPPRFIPPDMYRLRPPPNPRFGP 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,467
Number of Sequences: 438
Number of extensions: 11316
Number of successful extensions: 37
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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