Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_N21
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650...    31   0.91 
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601...    29   4.9  
07_03_0147 - 14437982-14438390,14438521-14438576                       28   8.5  

>05_03_0415 -
           13661745-13664240,13664376-13664401,13665018-13665035,
           13665914-13666181,13666531-13666598,13667102-13667243
          Length = 1005

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 392 SLPWPCRSRLRALPWRLLAKALSCCSTDSEPSFQALLKSCAS 267
           +L WP    L A+ +R L  AL+CC + S PS    L++C S
Sbjct: 107 TLRWPFPRLLDAIAFRPLPCALACCGS-SAPSVVRHLRACGS 147


>11_01_0727 -
           6010537-6010548,6011029-6011606,6011709-6011774,
           6011867-6011964,6013238-6013608
          Length = 374

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 77  PPHSVSRQYIMAAKFVVLFACIALAQGSDGATR 175
           PPH VSR ++ AA F    A  A A+G D   R
Sbjct: 41  PPHQVSRPWLPAAGFRSSAAASAAARGDDYGRR 73


>07_03_0147 - 14437982-14438390,14438521-14438576
          Length = 154

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 434 LLGRA--LDVLPRLFQSLPWPCRSRLRALPWR 345
           LL RA  L  LP   Q +PWP  SRL +  W+
Sbjct: 119 LLPRASVLAALPTTTQWIPWPAASRLGSRAWQ 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,933,915
Number of Sequences: 37544
Number of extensions: 305990
Number of successful extensions: 1130
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)