Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_N17
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical p... 38 0.010
Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical p... 38 0.010
Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.024
Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical pr... 37 0.024
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.024
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.024
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.29
AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical ... 33 0.38
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 0.89
U41548-1|AAA83205.2| 291|Caenorhabditis elegans Aquaporin or aq... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.3
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 28 8.3
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 28 8.3
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 28 8.3
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 28 8.3
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 28 8.3
>Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Frame = -1
Query: 450 MXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALYHGI---------WQYHWVYW 310
+ P+ +GL ++ + + TGAS+NPARS P++ I W H++YW
Sbjct: 192 LAPLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYW 247
>Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Frame = -1
Query: 450 MXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALYHGI---------WQYHWVYW 310
+ P+ +GL ++ + + TGAS+NPARS P++ I W H++YW
Sbjct: 192 LAPLAIGLTLSIDILSTGSITGASMNPARSLGPSIIGSIFATQKTSFYWNNHYIYW 247
>Z73905-1|CAA98110.1| 244|Caenorhabditis elegans Hypothetical
protein C32C4.2 protein.
Length = 244
Score = 36.7 bits (81), Expect = 0.024
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Frame = -1
Query: 450 MXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALYHGI-------------WQYHWVYW 310
+ P+ +G + + A +GAS+NPARSF P + + W YHW+Y+
Sbjct: 159 LAPLAIGFSLIIEILAAGAISGASMNPARSFGPNIMGQVFLKPEHLDAQYMYWNYHWIYY 218
Query: 309 V 307
+
Sbjct: 219 I 219
>Z71185-1|CAA94903.1| 290|Caenorhabditis elegans Hypothetical
protein C35A5.1 protein.
Length = 290
Score = 36.7 bits (81), Expect = 0.024
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = -1
Query: 459 PDPMXPVKLGLVVAGLVFAGXHATGASLNPARSFAP-----------ALYHGIWQYHWVY 313
P P +G++V +FA TG ++NP R+ +P +L W YH++Y
Sbjct: 204 PSEATPFIIGMMVIVNIFATASITGTAMNPVRALSPNIVGEIVLSSSSLPPNFWTYHYIY 263
Query: 312 W 310
W
Sbjct: 264 W 264
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.024
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +3
Query: 642 RXRXPPTXXPXXXPXRXPPG-APXGPWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
R PP+ P PPG P P P P P F PP G P PP
Sbjct: 286 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLF-XPPXXXGAAXPXPP 800
PPT P P R PP G W P P PG PP G P PP
Sbjct: 278 PPT--PGMTP-RPPPPPSSGMWPP--PPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.024
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +3
Query: 642 RXRXPPTXXPXXXPXRXPPG-APXGPWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
R PP+ P PPG P P P P P F PP G P PP
Sbjct: 296 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLF-XPPXXXGAAXPXPP 800
PPT P P R PP G W P P PG PP G P PP
Sbjct: 288 PPT--PGMTP-RPPPPPSSGMWPP--PPPPPPGRTPGPPGMPGMPPPPPP 332
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 648 RXPPTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
R P T P P R PP P P P P PP + P PP
Sbjct: 145 RVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
>AL034365-7|CAA22259.1| 421|Caenorhabditis elegans Hypothetical
protein Y69E1A.7 protein.
Length = 421
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 495 CCGVWKAHDEXGPDP--MXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALYHGIWQYH 322
C GV D P + P +G ++A L + G ++NPAR FAP L++ Y
Sbjct: 270 CLGVAAITDRRNGIPAFLQPAWIGALLAFLGMSLALNAGYAINPARDFAPRLFNLCAGYG 329
Query: 321 W 319
W
Sbjct: 330 W 330
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +3
Query: 693 PPGAPXGPWXXXXPXXPX-PGLFXPPXXXGAAXPXPP 800
PPG P P P P PG PP GA P PP
Sbjct: 112 PPGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPP 148
>U41548-1|AAA83205.2| 291|Caenorhabditis elegans Aquaporin or
aquaglyceroporin relatedprotein 7 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = -1
Query: 459 PDPMXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALY------HGIWQYH-WVYWV 307
P P+ GLVV + A G +NPAR P L+ G++ YH + +W+
Sbjct: 186 PGAAHPLLFGLVVMMIGTAYGMNLGYPINPARDLGPRLFSFFIYGSGVFSYHSYYFWI 243
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLFXP 764
PP P P PP P G + P P PG+F P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGG-FKGGPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXG--PWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
PP P PP P G P P P PG PP G P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLFXP 764
PP P P PP P G + P P PG+F P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGG-FKGGPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXG--PWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
PP P PP P G P P P PG PP G P PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLFXP 764
PP P P PP P G + P P PG+F P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGG-FKGGPPPPPPPGMFAP 378
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +3
Query: 654 PPTXXPXXXPXRXPPGAPXG--PWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
PP P PP P G P P P PG PP G P PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPP 347
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +2
Query: 482 QTPQHANXSXAVRARLHGRRRQXPTHXXXXXXXXXLPXPXPXXXVTGGXXHRNPXPPPPH 661
Q PQHA + R H +++ P P P V G PPPP
Sbjct: 774 QHPQHAQYLAWQQQRYHQQQQHQQQQQQGAPGGPRPPYPYPGGPVPPGPPQNRMPPPPPA 833
Query: 662 XXPP 673
P
Sbjct: 834 QGAP 837
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 681 PXRXPPGAPXGPWXXXXPXXPXPGLFXPPXXXGAAXPXP 797
P R PGA P P P PG++ PP A P P
Sbjct: 151 PPRGMPGAYPPP--RGYPPAPAPGVYMPPPGMPGAYPPP 187
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 681 PXRXPPGAPXGPWXXXXPXXPXPGLFXPPXXXGAAXPXP 797
P R PGA P P P PG++ PP A P P
Sbjct: 151 PPRGMPGAYPPP--RGYPPAPAPGVYMPPPGMPGAYPPP 187
>Z35595-2|CAA84642.1| 285|Caenorhabditis elegans Hypothetical
protein C01G6.1b protein.
Length = 285
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 459 PDPMXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALYHGIW 331
P + P+ +G + A + G +NPAR FAP L+ I+
Sbjct: 181 PTWLQPILVGTGFVAIGAAFGYNCGYPVNPARDFAPRLFTSIF 223
>Z35595-1|CAA84633.1| 290|Caenorhabditis elegans Hypothetical
protein C01G6.1a protein.
Length = 290
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 459 PDPMXPVKLGLVVAGLVFAGXHATGASLNPARSFAPALYHGIW 331
P + P+ +G + A + G +NPAR FAP L+ I+
Sbjct: 181 PTWLQPILVGTGFVAIGAAFGYNCGYPVNPARDFAPRLFTSIF 223
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +3
Query: 657 PTXXPXXXPXRXPPGAPXGPWXXXXPXXPXPGLFXPPXXXGAAXPXPP 800
P+ P PPG P GP P P P PP G PP
Sbjct: 234 PSDEPSPSDPPGPPGPP-GPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 304 THPVHPMILPNSVI*SRCEATSRVQASSRRVXPGENQPGHHESQLHG 444
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 401 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 447
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 304 THPVHPMILPNSVI*SRCEATSRVQASSRRVXPGENQPGHHESQLHG 444
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 476 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 522
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 304 THPVHPMILPNSVI*SRCEATSRVQASSRRVXPGENQPGHHESQLHG 444
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 410 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 456
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 304 THPVHPMILPNSVI*SRCEATSRVQASSRRVXPGENQPGHHESQLHG 444
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 554 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 600
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 304 THPVHPMILPNSVI*SRCEATSRVQASSRRVXPGENQPGHHESQLHG 444
T P H + P+S C TS A +R + G Q H Q G
Sbjct: 401 TSPRHSLATPSSYAHDTCHDTSLPDADTRSIDSGVVQSDHSNPQQSG 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,367,310
Number of Sequences: 27780
Number of extensions: 192194
Number of successful extensions: 1087
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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