Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_N13
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.35
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.35
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.46
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.46
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.46
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 32 0.60
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 31 1.4
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.4
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.4
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 1.8
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 1.8
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.8
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.4
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 30 2.4
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 30 2.4
Z81500-6|CAB04099.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 4.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 4.3
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 4.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.3
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 4.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.3
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 5.6
AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin... 29 5.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 28 7.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 7.4
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 28 7.4
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 28 7.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 28 9.8
U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical p... 28 9.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 9.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 9.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 9.8
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 9.8
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 28 9.8
AL110480-1|CAB60325.2| 437|Caenorhabditis elegans Hypothetical ... 28 9.8
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 9.8
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 9.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 9.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 9.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 9.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 9.8
AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical ... 28 9.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPPP P PP G P PPP
Sbjct: 310 PPGMPGMPPPPPPSRF----GPPGMGGMPPPPP 338
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 290 PPSSGMWPPPPPPPPG-RTPGPPGMPGMPPPPP 321
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P PPP P P PP P PP
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +2
Query: 758 PPXXPXXPP--PPXPXXXPXXXXPPXXEGXPGPPP 856
PP PP PP P P PP P PPP
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 780 PXPPXPXXXPXPXXPPXXRXXRXPPXP 860
P PP P P P PP PP P
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPP 302
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPPP P PP G P PPP
Sbjct: 320 PPGMPGMPPPPPPSRF----GPPGMGGMPPPPP 348
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 300 PPSSGMWPPPPPPPPG-RTPGPPGMPGMPPPPP 331
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P PPP P P PP P PP
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +2
Query: 758 PPXXPXXPP--PPXPXXXPXXXXPPXXEGXPGPPP 856
PP PP PP P P PP P PPP
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 780 PXPPXPXXXPXPXXPPXXRXXRXPPXP 860
P PP P P P PP PP P
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPP 312
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 733 PXPXTHLXPPXPXPPXPXPXPXXXXXXRGXPLXGGXXGXPPXP 861
P P L P PP P P P P GG G PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXP-----XXXXPPXXEGXPGPPP 856
PP PPPP P P PP G P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +2
Query: 779 PPPPXPXXXPXXXXPPXX---EGXPGPPP 856
PPPP P P PP +G P PPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 720 PPITGGPPPPPPP-----GGLPPITGGPPPPPP 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 733 PXPXTHLXPPXPXPPXPXPXPXXXXXXRGXPLXGGXXGXPPXP 861
P P L P PP P P P P GG G PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXP-----XXXXPPXXEGXPGPPP 856
PP PPPP P P PP G P PPP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +2
Query: 779 PPPPXPXXXPXXXXPPXX---EGXPGPPP 856
PPPP P P PP +G P PPP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 720 PPITGGPPPPPPP-----GGLPPITGGPPPPPP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 733 PXPXTHLXPPXPXPPXPXPXPXXXXXXRGXPLXGGXXGXPPXP 861
P P L P PP P P P P GG G PP P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 5/38 (13%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXP-----XXXXPPXXEGXPGPPP 856
PP PPPP P P PP G P PPP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Frame = +2
Query: 779 PPPPXPXXXPXXXXPPXX---EGXPGPPP 856
PPPP P P PP +G P PPP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 303 PPITGGPPPPPPP-----GGLPPITGGPPPPPP 330
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 727 ILPXPXTHLXPPXPXPPXPXPXPXXXXXXRGXPLXGG 837
I+P P + P P PP P P P G PL GG
Sbjct: 142 IVPPPVPEVSEPVPEPPIPAPGPVAPPTPSG-PLFGG 177
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P P P P P PP G PGPP
Sbjct: 223 PSEPPSPGPVDPSDEPSPSDPPGPPGPPGPP 253
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Frame = +2
Query: 761 PXXPXXPPP-----PXPXXXPXXXXPPXXEGXPGPP 853
P P PPP P P P P EG PGPP
Sbjct: 137 PCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPP 172
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PGPP
Sbjct: 132 PPQQPCEPITPPPCK-PCPQGPPGPPGPPGPP 162
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PGPP
Sbjct: 132 PPQQPCEPITPPPWK-PCPQGPPGPPGPPGPP 162
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PGPP
Sbjct: 132 PPQQPCEPITPPPCK-PCPQGPPGPPGPPGPP 162
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P PP P P PP +G GPP
Sbjct: 238 PGNDGPPGPPGPKGAPGPDGPPGVDGQSGPP 268
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PG P
Sbjct: 134 PPVAPCEPTTPPPCK-PCPQGPPGPPGPPGAP 164
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P P P G PG P
Sbjct: 145 PPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRP 176
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP PP G P PPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPP P PP G PPP
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPP P PP P PPP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P PP P P PP +G GPP
Sbjct: 233 PGNDGPPGPPGPKGAPGPDGPPGADGQSGPP 263
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PG P
Sbjct: 129 PPVAPCEPTTPPPCK-PCPQGPPGPPGPPGAP 159
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P P P G PG P
Sbjct: 140 PPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRP 171
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P PP P P PP +G GPP
Sbjct: 233 PGNDGPPGPPGPKGAPGPDGPPGADGQSGPP 263
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PG P
Sbjct: 129 PPVAPCEPTTPPPCK-PCPQGPPGPPGPPGAP 159
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P P P G PG P
Sbjct: 140 PPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRP 171
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPP P PP G P PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSP---PPPRAGSPPPPP 301
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P P P + PPP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 758 PPXXPXXPPPPX---PXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P P PP G PPP
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPP P PP G P PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSP---PPPRAGSPPPPP 322
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P P P + PPP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 758 PPXXPXXPPPPX---PXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P P PP G PPP
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPP P PP G P PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSP---PPPRAGSPPPPP 307
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P P P + PPP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 758 PPXXPXXPPPPX---PXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P P PP G PPP
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 735 MXXXSLXSPPXXPXXPXPPXPXXXPXPXXPPXXRXXRXPP 854
M L PP P PP P P P PP PP
Sbjct: 237 MGCSCLPPPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPP 276
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPP P PP PPP
Sbjct: 244 PPPSPVCMPPPPPPCPMPIPCPPPPPACSCPPP 276
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P P P P P PP +G PG P
Sbjct: 187 PAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQP 218
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P P P P P P +G PGPP
Sbjct: 130 PAGVPGQPGPKGPNGNPGAPAQPGGQGPPGPP 161
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PPP P P +G PG P
Sbjct: 268 PPGPPGYTPPPGPPGTPGVQGEAGQDGEPGVP 299
>Z81500-6|CAB04099.1| 221|Caenorhabditis elegans Hypothetical
protein F11D11.8 protein.
Length = 221
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Frame = +1
Query: 259 NDCFTDEECLLS-VNSLRQHH-------MLLAGFKDLGYSFVAGGNGKIYE----GAGWN 402
++CF D ECLL+ NS H+ A +KD+ YS V +G IY AGW+
Sbjct: 48 DECFEDSECLLAFFNSACFHYYTELPDATCPASYKDIKYS-VTSDSGDIYSWKKTDAGWS 106
Query: 403 H 405
+
Sbjct: 107 Y 107
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P PP +G PG P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 761 PXXPXXPP-PPXPXXXPXXXXPPXXEGXPGPP 853
P P PP PP P P P G GPP
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P PP +G PG P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 761 PXXPXXPP-PPXPXXXPXXXXPPXXEGXPGPP 853
P P PP PP P P P G GPP
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 771 PXXPXPPXPXXXPXPXXPPXXRXXRXPPXP 860
P P PP P P PP R PP P
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSP 167
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 759 PPXXPXXPXP--PXPXXXPXPXXPPXXRXXRXPPXP 860
PP P P P P P P P R R PP P
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P PP +G PG P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 761 PXXPXXPP-PPXPXXXPXXXXPPXXEGXPGPP 853
P P PP PP P P P G GPP
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P PP +G PG P
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 761 PXXPXXPP-PPXPXXXPXXXXPPXXEGXPGPP 853
P P PP PP P P P G GPP
Sbjct: 157 PAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPP 188
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 787 PPSTSSVPPPPPPL-------PPISSGAPPPPP 812
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PP P PP P PPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP PPPP P PP G P PPP
Sbjct: 787 PPSTSSVPPPPPPL-------PPISSGAPPPPP 812
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PP P PP P PPP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPP 798
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPG 847
PP P P PP P P PP +G PG
Sbjct: 223 PPGPPGPPGPPGPQGPP---GPPGKDGQPG 249
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P PP P P PP +G PGP
Sbjct: 148 PPKPPCQKCPPGP---PGPAGPPGPKGLPGP 175
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P P G PG P
Sbjct: 226 PPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLP 257
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P P P P P P G PGPP
Sbjct: 192 PGNPGRPGPAGPRGEPGTEYKPGQPGRPGPP 222
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PP P P PP P PPP
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXP---PXXEGXPGPPP 856
PP P PPP P P P P P PPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 770 PXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
P P PP P P PP P PPP
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = +2
Query: 758 PPXXPXXPPP---PXPXXXPXXXXPPXXEGXPGPPP 856
PP PPP P P P PP P PPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP 68
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 747 SLXSPPXXPXXPXPPXPXXXPXPXXPP 827
S SPP P P PP P P PP
Sbjct: 1334 SSPSPPPPPPPPPPPSDDLTPVPPPPP 1360
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP +G PGP
Sbjct: 130 PPQAPCDPITPPPCK-PCPQGPPGVQGPPGP 159
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = +2
Query: 770 PXXPPPPXPXXX----PXXXXPPXXEGXPGPPP 856
P PPPP P P PP G P PPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P PPP P P PP + PP
Sbjct: 22 PPPSPRRAPPPPPHRKPASLSPPPDDENTIRPP 54
>AF016686-7|AAB66241.2| 664|Caenorhabditis elegans C-type lectin
protein 44 protein.
Length = 664
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 126 SPRTPKNNRDGATNI--FATCFRFVECKSKS*GIPYSEMVI 10
+PR+P RDG T+I ATC +F+ K IP + +++
Sbjct: 545 TPRSPARCRDGFTSINNNATCVKFIAHKHYGTPIPCTYIIV 585
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PG P
Sbjct: 136 PPTAPCEPTTPPPCK-PCPQGPPGPPGPPGAP 166
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P P P G PG P
Sbjct: 147 PPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRP 178
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 779 PPPPXPXXXPXXXXPPXXEGXPGPPP 856
PPPP P PP P PPP
Sbjct: 498 PPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 706 YYYNPXXILPXPXTHL-XPPXPXPPXP 783
YY +P I P P ++ PP P PP P
Sbjct: 2270 YYKSPNLIPPPPPGYMHTPPLPPPPPP 2296
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P PP P P G PG P
Sbjct: 135 PPCNPCPPGPPGPQGPTGNSGQPGRPGNPGRP 166
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P P P P P PP G PG P
Sbjct: 136 PPTAPCEPTTPPPCK-PCPQGPPGPPGPPGAP 166
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
PP P PP P P P G PG P
Sbjct: 147 PPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRP 178
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 761 PXXPXXPP-PPXPXXXPXXXXPPXXEGXPGPP 853
P P PP PP P P P G GPP
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPP 204
>Z93393-6|CAB07691.2| 495|Caenorhabditis elegans Hypothetical
protein Y48E1B.5 protein.
Length = 495
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -2
Query: 650 IKPMGPTFDF*LQXXXQDXACLSTXGDQRRGSLQSISYFQLPQAKKSWTA 501
I P+ P DF + D L+ Q++ + SI + + K WT+
Sbjct: 332 IYPISPVIDFSMDTIYNDDVLLTRRSQQQKTHIHSILWSREQDQKYPWTS 381
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Frame = +2
Query: 761 PXXPXXPP-PPXPXXXPXXXXPPXXEGXPGPP 853
P P PP PP P P P G GPP
Sbjct: 173 PAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPP 204
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 132 PPQQPCDPITPPPCQ-PCPQGPPGPPGPPGP 161
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 99 PPQQPCDPITPPPCQ-PCPQGPPGPPGPPGP 128
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 132 PPQQPCDPITPPPCQ-PCPQGPPGPPGPPGP 161
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 122 PPKEPCEPITPPPCK-PCPEGPPGPAGPPGP 151
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P P P P P P E P P P
Sbjct: 98 PPPPPPTQPEPEPEPRPEPQPEPQPEPQPEPQP 130
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
PP P P P P P P E P P P
Sbjct: 102 PPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQP 134
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 770 PXXPPPPXPXXXPXXXXPPXXEGXPGPP 853
P P PP P P P +G PG P
Sbjct: 194 PGPPGPPGPSGQPGQDGHPGQDGQPGQP 221
>U97196-12|AAB52456.2| 564|Caenorhabditis elegans Hypothetical
protein B0207.1 protein.
Length = 564
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 770 PXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
P PPPP P P P PPP
Sbjct: 121 PQCPPPPVPHPPQITQMAPILPTSPAPPP 149
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
P PPPP P P P G P PPP
Sbjct: 624 PISSAAPPPPPPP--PPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
P PPPP P P P G P PPP
Sbjct: 450 PISSAAPPPPPPP--PPMGLPAVGAGAPPPPP 479
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 733 PXPXTHLXPPXPXPPXPXPXPXXXXXXRGXPLXGGXXGXPPXP 861
P P H PP P P P P P P P P
Sbjct: 135 PPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPP 177
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 149 RCIQGSETHQEHQKIIETVQPTSLQPVLDLSNANQN 42
+C++ + QK+IE V+P LQ ++D N +
Sbjct: 457 KCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNS 492
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 780 PXPPXPXXXPXPXXPPXXRXXRXPP 854
P PP P P PP R R PP
Sbjct: 34 PRPPRPPSPSRPQRPPPSRPQRPPP 58
>AL110480-1|CAB60325.2| 437|Caenorhabditis elegans Hypothetical
protein Y24F12A.1 protein.
Length = 437
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 107 FFGVLGEFRNPECSVRMRRNSHHRMEW 187
FFG++ F P+ V ++ NS + +EW
Sbjct: 181 FFGLIANFIKPDLFVDVKGNSSYDVEW 207
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 121 PPAQPCDPITPPPCR-PCPQGPPGAPGSPGP 150
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 142 PPAQPCHPITPPPCR-PCPQGPPGAPGSPGP 171
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 758 PPXXPXXPPPPXPXXXPXXXXPPXXEGXPGP 850
PP P P P P P PP G PGP
Sbjct: 124 PPKEPCEPLTPPPCK-PCPEGPPGPAGPPGP 153
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 756 SPPXXPXXPXPPXPXXXPXPXXPPXXRXXRXPPXP 860
SPP P P P P PP R PP P
Sbjct: 72 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIP 106
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 756 SPPXXPXXPXPPXPXXXPXPXXPPXXRXXRXPPXP 860
SPP P P P P PP R PP P
Sbjct: 294 SPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIP 328
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +2
Query: 761 PXXPXXPPPPXPXXXPXXXXPPXXEGXPGPPP 856
P P PPPP P PP PPP
Sbjct: 713 PGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPP 744
>AC024770-8|AAF59486.1| 740|Caenorhabditis elegans Hypothetical
protein Y39H10A.2 protein.
Length = 740
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 322 LLAGFKDLGYSFVAGGNGKIYEGAGWNHIGAHTLHYN 432
+L+GF D+ F + EG GW A + H N
Sbjct: 247 ILSGFSDIFQKFQLNDKTRKEEGFGWKLFSAFSFHRN 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,114,477
Number of Sequences: 27780
Number of extensions: 457515
Number of successful extensions: 3772
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2854
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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