Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_N13
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   4.8  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   4.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   4.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   4.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   4.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   4.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.3  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   8.4  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +3

Query: 762 PXXPXXPXPPXPXXXPXPXXPPXXRXXRXP 851
           P  P    PP P   P P  PP     + P
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 483 RQLLPKVSNETDPYGYIIVV 424
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
 Frame = -2

Query: 155 FGRCI-QGSETHQEHQKIIETVQP-------TSLQPVLDLSNANQNLKE 33
           F  C+  G+ TH+E +  I+T+QP       TS + + ++ N N N+++
Sbjct: 8   FAICVCVGAMTHEELKTGIQTLQPICVGETGTSQKIIDEVYNGNVNVED 56


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 396 SRSFINFSVASSHE*IAQVLE 334
           +RSF+ FS+  S + +A+V++
Sbjct: 295 ARSFVPFSIERSSQSVAEVMD 315


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 483 RQLLPKVSNETDPYGYIIVV 424
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 79  KDVGCTVSIIFWCSW 123
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 79  KDVGCTVSIIFWCSW 123
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 79  KDVGCTVSIIFWCSW 123
           ++ G T  II WC+W
Sbjct: 377 RNSGATDKIIRWCTW 391


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 757 PPXPXPPXPXP 789
           PP P PP P P
Sbjct: 338 PPKPAPPPPPP 348


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 524 VGVENNLLTEDYHVVGHXQLINTL 595
           VG+ N +    + V+GH Q  +T+
Sbjct: 177 VGISNEVELPQFRVLGHRQRHSTI 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,975
Number of Sequences: 438
Number of extensions: 6991
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)