Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_N12
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070378-1|AAH70378.1|  158|Homo sapiens basic transcription fac...   167   4e-41
BC022371-1|AAH22371.1|  158|Homo sapiens BTF3L4 protein protein.      167   4e-41
AL445685-6|CAI17032.1|  158|Homo sapiens basic transcription fac...   167   4e-41
AL139156-5|CAI22856.1|  158|Homo sapiens basic transcription fac...   167   4e-41
AK027750-1|BAB55342.1|  158|Homo sapiens protein ( Homo sapiens ...   167   4e-41
X74070-1|CAA52200.1|  162|Homo sapiens transcription factor BTF3...   163   6e-40
X53281-1|CAA37376.1|  162|Homo sapiens general transcription fac...   163   6e-40
X53280-1|CAA37375.1|  206|Homo sapiens general transcription fac...   163   6e-40
BT007120-1|AAP35784.1|  162|Homo sapiens basic transcription fac...   163   6e-40
BC008062-1|AAH08062.1|  162|Homo sapiens basic transcription fac...   163   6e-40
AB062126-1|BAB93458.1|  162|Homo sapiens transcription factor BT...   163   6e-40
M90356-1|AAA58401.1|  214|Homo sapiens BTF3 homologue protein.        150   8e-36
BC021004-1|AAH21004.1|  153|Homo sapiens BTF3L4 protein protein.      138   3e-32
M90357-1|AAA58398.1|  158|Homo sapiens basic transcription facto...    96   5e-24
M90354-1|AAA58400.1|  111|Homo sapiens BTF3 homologue protein.        110   6e-24
BC062736-1|AAH62736.1|  102|Homo sapiens LOC503543 protein protein.    75   5e-13
M90355-1|AAB04035.1|   67|Homo sapiens BTF3 homologue protein.         50   2e-05

>BC070378-1|AAH70378.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score =  167 bits (407), Expect = 4e-41
 Identities = 83/117 (70%), Positives = 89/117 (76%)
 Frame = +1

Query: 190 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 369
           MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 370 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA 540
           K+DGTVIHFNNPK QASL+ANTFAITGH E K  TEMLPGILSQLG D L  L+++A
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           EDD+VP+LV NFDEAS
Sbjct: 138 EDDDVPDLVENFDEAS 153


>BC022371-1|AAH22371.1|  158|Homo sapiens BTF3L4 protein protein.
          Length = 158

 Score =  167 bits (407), Expect = 4e-41
 Identities = 83/117 (70%), Positives = 89/117 (76%)
 Frame = +1

Query: 190 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 369
           MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 370 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA 540
           K+DGTVIHFNNPK QASL+ANTFAITGH E K  TEMLPGILSQLG D L  L+++A
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           EDD+VP+LV NFDEAS
Sbjct: 138 EDDDVPDLVENFDEAS 153


>AL445685-6|CAI17032.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score =  167 bits (407), Expect = 4e-41
 Identities = 83/117 (70%), Positives = 89/117 (76%)
 Frame = +1

Query: 190 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 369
           MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 370 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA 540
           K+DGTVIHFNNPK QASL+ANTFAITGH E K  TEMLPGILSQLG D L  L+++A
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           EDD+VP+LV NFDEAS
Sbjct: 138 EDDDVPDLVENFDEAS 153


>AL139156-5|CAI22856.1|  158|Homo sapiens basic transcription factor
           3-like 4 protein.
          Length = 158

 Score =  167 bits (407), Expect = 4e-41
 Identities = 83/117 (70%), Positives = 89/117 (76%)
 Frame = +1

Query: 190 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 369
           MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 370 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA 540
           K+DGTVIHFNNPK QASL+ANTFAITGH E K  TEMLPGILSQLG D L  L+++A
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           EDD+VP+LV NFDEAS
Sbjct: 138 EDDDVPDLVENFDEAS 153


>AK027750-1|BAB55342.1|  158|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
           TRANSCRIPTION FACTOR BTF3. ).
          Length = 158

 Score =  167 bits (407), Expect = 4e-41
 Identities = 83/117 (70%), Positives = 89/117 (76%)
 Frame = +1

Query: 190 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 369
           MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIEEVNMI
Sbjct: 1   MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60

Query: 370 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA 540
           K+DGTVIHFNNPK QASL+ANTFAITGH E K  TEMLPGILSQLG D L  L+++A
Sbjct: 61  KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 117



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           EDD+VP+LV NFDEAS
Sbjct: 138 EDDDVPDLVENFDEAS 153


>X74070-1|CAA52200.1|  162|Homo sapiens transcription factor BTF3
           protein.
          Length = 162

 Score =  163 bits (397), Expect = 6e-40
 Identities = 81/125 (64%), Positives = 89/125 (71%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIE
Sbjct: 1   MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           EVNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 61  EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120

Query: 535 IASSV 549
           +A ++
Sbjct: 121 LAEAL 125



 Score = 31.9 bits (69), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 551 PRLSHSREDDEVPNLVGNFDEAS 619
           P  +   +DDEVP+LV NFDEAS
Sbjct: 135 PLATGEDDDDEVPDLVENFDEAS 157


>X53281-1|CAA37376.1|  162|Homo sapiens general transcription factor
           protein.
          Length = 162

 Score =  163 bits (397), Expect = 6e-40
 Identities = 81/125 (64%), Positives = 89/125 (71%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIE
Sbjct: 1   MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           EVNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 61  EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120

Query: 535 IASSV 549
           +A ++
Sbjct: 121 LAEAL 125



 Score = 31.9 bits (69), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 551 PRLSHSREDDEVPNLVGNFDEAS 619
           P  +   +DDEVP+LV NFDEAS
Sbjct: 135 PLATGEDDDDEVPDLVENFDEAS 157


>X53280-1|CAA37375.1|  206|Homo sapiens general transcription factor
            protein.
          Length = 206

 Score =  163 bits (397), Expect = 6e-40
 Identities = 81/125 (64%), Positives = 89/125 (71%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIE
Sbjct: 45  MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 104

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           EVNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 105 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 164

Query: 535 IASSV 549
           +A ++
Sbjct: 165 LAEAL 169



 Score = 31.9 bits (69), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 551 PRLSHSREDDEVPNLVGNFDEAS 619
           P  +   +DDEVP+LV NFDEAS
Sbjct: 179 PLATGEDDDDEVPDLVENFDEAS 201


>BT007120-1|AAP35784.1|  162|Homo sapiens basic transcription factor
           3 protein.
          Length = 162

 Score =  163 bits (397), Expect = 6e-40
 Identities = 81/125 (64%), Positives = 89/125 (71%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIE
Sbjct: 1   MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           EVNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 61  EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120

Query: 535 IASSV 549
           +A ++
Sbjct: 121 LAEAL 125



 Score = 31.9 bits (69), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 551 PRLSHSREDDEVPNLVGNFDEAS 619
           P  +   +DDEVP+LV NFDEAS
Sbjct: 135 PLATGEDDDDEVPDLVENFDEAS 157


>BC008062-1|AAH08062.1|  162|Homo sapiens basic transcription factor
           3 protein.
          Length = 162

 Score =  163 bits (397), Expect = 6e-40
 Identities = 81/125 (64%), Positives = 89/125 (71%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIE
Sbjct: 1   MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           EVNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 61  EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120

Query: 535 IASSV 549
           +A ++
Sbjct: 121 LAEAL 125



 Score = 31.9 bits (69), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 551 PRLSHSREDDEVPNLVGNFDEAS 619
           P  +   +DDEVP+LV NFDEAS
Sbjct: 135 PLATGEDDDDEVPDLVENFDEAS 157


>AB062126-1|BAB93458.1|  162|Homo sapiens transcription factor BTF 3
           protein.
          Length = 162

 Score =  163 bits (397), Expect = 6e-40
 Identities = 81/125 (64%), Positives = 89/125 (71%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA  DD           VN I GIE
Sbjct: 1   MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           EVNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 61  EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120

Query: 535 IASSV 549
           +A ++
Sbjct: 121 LAEAL 125



 Score = 31.9 bits (69), Expect = 3.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 551 PRLSHSREDDEVPNLVGNFDEAS 619
           P  +   +DDEVP+LV NFDEAS
Sbjct: 135 PLATGEDDDDEVPDLVENFDEAS 157


>M90356-1|AAA58401.1|  214|Homo sapiens BTF3 homologue protein.
          Length = 214

 Score =  150 bits (363), Expect = 8e-36
 Identities = 77/134 (57%), Positives = 88/134 (65%)
 Frame = +1

Query: 172 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGI 351
           T +++     KL KLQ+QVRIGGKGT  RKKKV H TA  DD           VN I GI
Sbjct: 30  TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGI 89

Query: 352 EEVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLK 531
           E+VNM    GTVIHFNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L  L+
Sbjct: 90  EKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLR 149

Query: 532 RIASSVAAPKPLEG 573
           R+A  V   +P++G
Sbjct: 150 RLA-EVLPKQPVDG 162


>BC021004-1|AAH21004.1|  153|Homo sapiens BTF3L4 protein protein.
          Length = 153

 Score =  138 bits (334), Expect = 3e-32
 Identities = 68/100 (68%), Positives = 74/100 (74%)
 Frame = +1

Query: 241 KGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 420
           +GT RRKKKVVH TA  DD           VN I GIEEVNMIK+DGTVIHFNNPK QAS
Sbjct: 13  QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72

Query: 421 LAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIA 540
           L+ANTFAITGH E K  TEMLPGILSQLG D L  L+++A
Sbjct: 73  LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLA 112



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           EDD+VP+LV NFDEAS
Sbjct: 133 EDDDVPDLVENFDEAS 148


>M90357-1|AAA58398.1|  158|Homo sapiens basic transcription factor
           3a protein.
          Length = 158

 Score = 95.9 bits (228), Expect(2) = 5e-24
 Identities = 44/65 (67%), Positives = 50/65 (76%)
 Frame = +1

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 534
           +VNM    GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L  L+R
Sbjct: 67  KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126

Query: 535 IASSV 549
           +A ++
Sbjct: 127 LAEAL 131



 Score = 35.9 bits (79), Expect(2) = 5e-24
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGK 243
           +K + MN EKL KLQ+QVRIGGK
Sbjct: 45  MKETIMNQEKLAKLQAQVRIGGK 67


>M90354-1|AAA58400.1|  111|Homo sapiens BTF3 homologue protein.
          Length = 111

 Score =  110 bits (265), Expect = 6e-24
 Identities = 61/106 (57%), Positives = 69/106 (65%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN +KL K Q++V  G KGT  RKK VVH TA  +D           VN IPGIE
Sbjct: 1   MKETIMN-QKLTKRQAEVHTGRKGTAHRKK-VVHTTA--EDKKFQFSLKKLGVNNIPGIE 56

Query: 355 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGI 492
           EVNM    GTVIHFNNP+ QASLAANTF +TGH E KQ TEML  I
Sbjct: 57  EVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102


>BC062736-1|AAH62736.1|  102|Homo sapiens LOC503543 protein protein.
          Length = 102

 Score = 74.5 bits (175), Expect = 5e-13
 Identities = 35/64 (54%), Positives = 44/64 (68%)
 Frame = +1

Query: 358 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 537
           +N  K   T+IHFNNP+ QA LA NTF ITGHGE KQ TEML  +L+QL    L  L+R+
Sbjct: 1   MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60

Query: 538 ASSV 549
           A ++
Sbjct: 61  AEAL 64


>M90355-1|AAB04035.1|   67|Homo sapiens BTF3 homologue protein.
          Length = 67

 Score = 49.6 bits (113), Expect = 2e-05
 Identities = 31/72 (43%), Positives = 39/72 (54%)
 Frame = +1

Query: 175 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 354
           +K + MN EKL KLQ++V IGG      +KKVVH TA  +D           ++   GIE
Sbjct: 1   MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLEIS---GIE 54

Query: 355 EVNMIKEDGTVI 390
           EVNM     TVI
Sbjct: 55  EVNMFTNQATVI 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,283,168
Number of Sequences: 237096
Number of extensions: 1939120
Number of successful extensions: 7677
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7674
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)