Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_N12
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29488-6|AAA68776.1|  161|Caenorhabditis elegans Inhibitor of ce...   165   4e-41
AL117195-17|CAB60767.1|  534|Caenorhabditis elegans Hypothetical...    30   2.0  
U88167-2|AAB42225.3|  908|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    29   6.0  

>U29488-6|AAA68776.1|  161|Caenorhabditis elegans Inhibitor of cell
           death protein 1 protein.
          Length = 161

 Score =  165 bits (401), Expect = 4e-41
 Identities = 80/131 (61%), Positives = 98/131 (74%), Gaps = 3/131 (2%)
 Frame = +1

Query: 181 NSRMNSEKLKKLQSQ---VRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGI 351
           +S+  +E++KKLQ+Q   VRIGGKGTPRRKKKV+H TAA DD           V  IPGI
Sbjct: 2   DSKAIAERIKKLQAQQEHVRIGGKGTPRRKKKVIHKTAAADDKKLQSNLKKLSVTNIPGI 61

Query: 352 EEVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLK 531
           EEVNMIK+DGTVIHFNNPK Q S+ ANTF++TG  +NKQ TEMLPGIL+QLGP+ L  LK
Sbjct: 62  EEVNMIKDDGTVIHFNNPKVQTSVPANTFSVTGSADNKQITEMLPGILNQLGPESLTHLK 121

Query: 532 RIASSVAAPKP 564
           ++A++V    P
Sbjct: 122 KLANNVTKLGP 132



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 572 EDDEVPNLVGNFDEAS 619
           ED++VP LVG+FD AS
Sbjct: 137 EDEDVPELVGDFDAAS 152


>AL117195-17|CAB60767.1|  534|Caenorhabditis elegans Hypothetical
           protein Y57A10A.24 protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = -2

Query: 593 G*VPRRLPSSGLGAATLDAILFSRFKPSGPSWLRIPGSISVVCLFSPCPVIANVFAASDA 414
           G VPR       G  T    L  +F+ S       P  + V C  + CP  + VFA S  
Sbjct: 221 GLVPRDCNKKPCGMGTSKLKLHRKFQISSYECSLTPTGLRVCCSLAQCP--SGVFARS-V 277

Query: 413 CAFGLL---KCITVPSSL 369
           CA G L   KC+ + + +
Sbjct: 278 CAAGCLRNEKCMEIQNEM 295


>U88167-2|AAB42225.3|  908|Caenorhabditis elegans Hypothetical
           protein D2092.5 protein.
          Length = 908

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
 Frame = -2

Query: 578 RLPSSGLGAATLDAILFSRFKPSGPSWLRIPGSI-SVVCLFSPC-PVIANVFAASDACAF 405
           R+  + LG  +LDA+   RF+   P+WL I  +  S+      C   IAN  AA  +  F
Sbjct: 44  RIVVTWLGMVSLDAMTGFRFELLWPTWLMIRAAAESIQMRNQHCVTTIANPTAARFSVLF 103

Query: 404 GLLKCITVPSSLIIF 360
               C+T  S LI +
Sbjct: 104 ---ICVTATSDLICY 115


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 306 AVIAQKVVSEHNSWHRRGKYDQRGR 380
           ++I+  V + H++WH  G  D RGR
Sbjct: 34  SIISGDVNAHHSAWHSEGSEDTRGR 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,729,477
Number of Sequences: 27780
Number of extensions: 307549
Number of successful extensions: 762
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)