Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_N11
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.21
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.21
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.21
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.27
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.27
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.27
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.9
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 5.9
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 652 PPPXKXGXXPPNXXGXXPPPXXXXNFFFXPPXTPXXAPXQKKXRGKKPXG 801
PPP + G PP G PPP + PP P RG P G
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 652 PPPXKXGXXPPNXXGXXPPPXXXXNFFFXPPXTPXXAPXQKKXRGKKPXG 801
PPP + G PP G PPP + PP P RG P G
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 652 PPPXKXGXXPPNXXGXXPPPXXXXNFFFXPPXTPXXAPXQKKXRGKKPXG 801
PPP + G PP G PPP + PP P RG P G
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTG 316
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 635 PXXXXXPPHXKXGXXXXTXXGGPPPPPXXXIFFFXPXXPPXXPP 766
P PP G G PPPPP + P PP PP
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 635 PXXXXXPPHXKXGXXXXTXXGGPPPPPXXXIFFFXPXXPPXXPP 766
P PP G G PPPPP + P PP PP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +2
Query: 635 PXXXXXPPHXKXGXXXXTXXGGPPPPPXXXIFFFXPXXPPXXPP 766
P PP G G PPPPP + P PP PP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 695 GGPPPPPXXXIFF-FXPXXPPXXPPXKKKXXVKNP 796
GGPPPPP +F P P PP KK V P
Sbjct: 782 GGPPPPPPPGMFAPMAPVIPDYLPP-KKVPKVDGP 815
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 635 PXXXXXPPHXKXGXXXXTXXGGPPPPPXXXIFFFXPXXPPXXPP 766
P PP G G PPPPP + PP PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 652 PPPXKXGXXPPNXXGXXPPPXXXXNFFFXPPXTP 753
PPP G PP G PPP PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 695 GGPPPPPXXXIFF-FXPXXPPXXPPXKKKXXVKNP 796
GGPPPPP +F P P PP KK V P
Sbjct: 782 GGPPPPPPPGMFAPMAPVIPDYLPP-KKVPKVDGP 815
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 635 PXXXXXPPHXKXGXXXXTXXGGPPPPPXXXIFFFXPXXPPXXPP 766
P PP G G PPPPP + PP PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 652 PPPXKXGXXPPNXXGXXPPPXXXXNFFFXPPXTP 753
PPP G PP G PPP PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 695 GGPPPPPXXXIFF-FXPXXPPXXPPXKKKXXVKNP 796
GGPPPPP +F P P PP KK V P
Sbjct: 365 GGPPPPPPPGMFAPMAPVIPDYLPP-KKVPKVDGP 398
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 635 PXXXXXPPHXKXGXXXXTXXGGPPPPPXXXIFFFXPXXPPXXPP 766
P PP G G PPPPP + PP PP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 652 PPPXKXGXXPPNXXGXXPPPXXXXNFFFXPPXTP 753
PPP G PP G PPP PP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 401 APPXXPXGGGXKKGGXF*KKKXXXXGGGGXXXKXXFXXGGGXC 273
APP P GGG GG GGGG GGG C
Sbjct: 73 APPPAPCGGGCGGGGG-----GCGGGGGGCGGGGGCGGGGGGC 110
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 401 APPXXPXGGGXKKGGXF*KKKXXXXGGGGXXXKXXFXXGGGXC 273
APP P GGG GG GGGG GGG C
Sbjct: 73 APPPAPCGGGCGGGGG-----GCGGGGGGCGGGGGCGGGGGGC 110
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 701 PPPPPXXXIFFFXPXXPPXXPPXKKK 778
PPPPP I P PP PP K
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLK 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,966,646
Number of Sequences: 27780
Number of extensions: 212540
Number of successful extensions: 767
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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