Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_N07
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1035 + 33659965-33660155,33660992-33661066,33661634-336616...    32   0.68 
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886...    29   3.6  
10_01_0003 + 46158-46428,46588-46706,46819-46928,48977-49415,495...    29   4.8  

>02_05_1035 +
           33659965-33660155,33660992-33661066,33661634-33661670,
           33662415-33662487,33662635-33662801
          Length = 180

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 520 TMEACSYQEARFVHKSIYVFILWVKQWESPVKCWTLMKRRK 642
           TM   SYQ+  + H +  +++ W K +  P + W   KRRK
Sbjct: 85  TMHLRSYQQGSWHHPNQGLYVYWAKSFAQPARLW---KRRK 122


>01_05_0478 -
           22587881-22588021,22588126-22588266,22588436-22588643,
           22589199-22589238,22589425-22589647,22590826-22590970,
           22591053-22591156,22591298-22591396,22591506-22591684,
           22591948-22592167
          Length = 499

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 335 IEARRECGFIRKS*INKRNDMAHRRNGMVP 424
           +  RRE G IR S  +K+ D AHR++  +P
Sbjct: 305 LRKRRELGDIRSSETSKKTDKAHRKDKELP 334


>10_01_0003 +
           46158-46428,46588-46706,46819-46928,48977-49415,
           49511-49633,49805-50106,50143-50350,50729-51448
          Length = 763

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 570 LRLHTLGKAMGIPSEVLDPHEAQKIFPLLDPSA 668
           L+L T  +A G+PSEV     + K++ LLDP+A
Sbjct: 659 LQLLTGKQAAGLPSEVRRAMSSGKLWSLLDPTA 691


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,605,174
Number of Sequences: 37544
Number of extensions: 481543
Number of successful extensions: 1053
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)