SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_N06
         (919 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    26   0.55 
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   2.9  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   6.8  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   6.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.8  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   6.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    22   6.8  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   6.8  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    22   6.8  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    22   6.8  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    22   6.8  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    22   6.8  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   6.8  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   6.8  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   6.8  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    22   6.8  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   6.8  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   6.8  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   6.8  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    22   6.8  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    22   6.8  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   6.8  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   6.8  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   6.8  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   6.8  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   6.8  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   6.8  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   6.8  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    22   6.8  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   6.8  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   9.0  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 25.8 bits (54), Expect = 0.55
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 475 SHVLSCVIPLILWITVLPPLSELIPLAA 392
           S +LS V+ L+L   +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 496 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 398
           G  ++ CS +L S  +  +L   ++PP S  IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 149 IGPPTPFPRFIPP 161


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 149 IGPPTPFPRFIPP 161


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 149 IGPPTPFPRFIPP 161


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 155 IGPPTPFPRFIPP 167


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 150 IGPPTPFPRFIPP 162


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 150 IGPPTPFPRFIPP 162


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 145 IGPPTPFPRFIPP 157


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 145 IGPPTPFPRFIPP 157


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 145 IGPPTPFPRFIPP 157


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 145 IGPPTPFPRFIPP 157


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 156 IGPPTPFPRFIPP 168


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 156 IGPPTPFPRFIPP 168


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 159 IGPPTPFPRFIPP 171


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 149 IGPPTPFPRFIPP 161


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 154 IGPPTPFPRFIPP 166


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 154 IGPPTPFPRFIPP 166


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 154 IGPPTPFPRFIPP 166


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 151 IGPPTPFPRFIPP 163


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 161 IGPPTPFPRFIPP 173


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 370 IGPPTPFPRFIPP 382


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 376 IGPPTPFPRFIPP 388


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 376 IGPPTPFPRFIPP 388


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 396 IGPPTPFPRFIPP 408


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 366 IGPPTPFPRFIPP 378


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 377 IGPPTPFPRFIPP 389


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 377 IGPPTPFPRFIPP 389


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 366 IGPPTPFPRFIPP 378


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 384 IGPPTPFPRFIPP 396


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 370 IGPPTPFPRFIPP 382


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 388 IGPPTPFPRFIPP 400


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 870 LSPPXPXPRXXPP 908
           + PP P PR  PP
Sbjct: 398 IGPPTPFPRFIPP 410


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -1

Query: 475 SHVLSCVIPLILWITVLPPLSELIPL 398
           S +LS  +  +L   ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,325
Number of Sequences: 438
Number of extensions: 5397
Number of successful extensions: 55
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -