BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_N06
(919 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.55
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 2.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 6.8
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 6.8
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 6.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 6.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 6.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 6.8
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 6.8
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 6.8
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 6.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 6.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 6.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 6.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 6.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 6.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 6.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 9.0
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.55
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 475 SHVLSCVIPLILWITVLPPLSELIPLAA 392
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 496 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 398
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 149 IGPPTPFPRFIPP 161
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 149 IGPPTPFPRFIPP 161
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 149 IGPPTPFPRFIPP 161
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 155 IGPPTPFPRFIPP 167
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 150 IGPPTPFPRFIPP 162
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 150 IGPPTPFPRFIPP 162
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 145 IGPPTPFPRFIPP 157
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 145 IGPPTPFPRFIPP 157
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 145 IGPPTPFPRFIPP 157
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 145 IGPPTPFPRFIPP 157
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 156 IGPPTPFPRFIPP 168
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 156 IGPPTPFPRFIPP 168
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 159 IGPPTPFPRFIPP 171
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 149 IGPPTPFPRFIPP 161
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 154 IGPPTPFPRFIPP 166
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 154 IGPPTPFPRFIPP 166
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 154 IGPPTPFPRFIPP 166
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 151 IGPPTPFPRFIPP 163
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 161 IGPPTPFPRFIPP 173
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 370 IGPPTPFPRFIPP 382
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 376 IGPPTPFPRFIPP 388
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 376 IGPPTPFPRFIPP 388
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 396 IGPPTPFPRFIPP 408
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 366 IGPPTPFPRFIPP 378
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 377 IGPPTPFPRFIPP 389
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 377 IGPPTPFPRFIPP 389
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 366 IGPPTPFPRFIPP 378
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 384 IGPPTPFPRFIPP 396
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 370 IGPPTPFPRFIPP 382
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 388 IGPPTPFPRFIPP 400
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +3
Query: 870 LSPPXPXPRXXPP 908
+ PP P PR PP
Sbjct: 398 IGPPTPFPRFIPP 410
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 475 SHVLSCVIPLILWITVLPPLSELIPL 398
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,325
Number of Sequences: 438
Number of extensions: 5397
Number of successful extensions: 55
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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