Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_N03
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 32 0.48
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.5
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.5
U41272-6|AAA82450.2| 331|Caenorhabditis elegans Serpentine rece... 29 4.4
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 121 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 252
PT + T T TT T+ P TTT ET T +TT T T P
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTP 154
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 124 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVP 252
T T T TT T+ +P TTT T T +TT T T P
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP 241
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 121 PTLKETA-TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVP 252
PT TA T TT T+ P TTT + T T TT T T P
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTP 234
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 118 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRP 264
WP ET TT T+ +P TTT+ T T TT + T T P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +1
Query: 118 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRP 264
WP ET TT T+ +P TTT+ T T TT + T T P
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQ-RTTPYTTTTTTTAAP 345
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 106 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVP 252
LC+LW L T T TT T+ + TTT + T T T T TVP
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVP 230
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 121 PTLKETATNLLTTARTSLILPKTTTLMET---ATNLSTTVHITWTVPKGRPY---FKPTP 282
PT AT +TT T+ P TTT+ T A ++TT I TVP + + KP P
Sbjct: 191 PTTTTIATTRITTKTTTSPPPFTTTVTTTTSAARTIATTTPIK-TVPPVKVFGKAIKPIP 249
Query: 283 FPG 291
PG
Sbjct: 250 TPG 252
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 124 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 252
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/59 (35%), Positives = 23/59 (38%)
Frame = +1
Query: 121 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGCS 297
PT T T TT+ TS TTT T STT T T P T P C+
Sbjct: 79 PTTTTTTTPTTTTSTTS-----TTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCN 132
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = +1
Query: 136 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP------KGRPYFKPTPFPGCS 297
T T +T T+ P TTT E L+T TWT P + P PT P
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAPPTTTVKRTTPQTVPTTTPKIP 688
Query: 298 RW 303
RW
Sbjct: 689 RW 690
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = +1
Query: 136 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP------KGRPYFKPTPFPGCS 297
T T +T T+ P TTT E L+T TWT P + P PT P
Sbjct: 632 TTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAPPTTTVKRTTPQTVPTTTPKIP 688
Query: 298 RW 303
RW
Sbjct: 689 RW 690
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 124 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTP 282
T T T TT T+ P TTT T T T P+G F TP
Sbjct: 62 TSTSTPTTTTTTTTTTTTTPTTTTTTTTTTTPEPTTTKVKVCPQGYTSFLRTP 114
>U41272-6|AAA82450.2| 331|Caenorhabditis elegans Serpentine
receptor, class u protein48 protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Frame = -3
Query: 419 LSTTICLFIYSVDINSYEILKYIVNTLFRY*FSKIFFTSHREHPGKGVGLK*GRPLGTVH 240
L + I + +Y E Y+ T F F ++ +P KG + G PLG
Sbjct: 130 LFSIIRMIVYVTPTRHAEWSSYVFYTFIPLAFFSPFGITYFMYPAKGYCRQWGSPLGFGS 189
Query: 239 VICTVVDRF--VAVSIRVVVFGRINDVRAVVNRFVAVSLSVGHSQ 111
V + + + + I + + ++N F + ++VG+S+
Sbjct: 190 VFISYTETYDEIRHDIFFIPLTLAVPLLIIINNFALIVMAVGYSK 234
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +1
Query: 124 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTP 282
T T T TT T+ P TTT T T +TT T T P + TP
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTP 140
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 121 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT---VPKGRPYFKPT 279
PT TTA T++ PK TT + T T +TTV T T P+G F+PT
Sbjct: 169 PTTTTVRKTTQTTA-TTMTTPKPTTTVSTTT--TTTVPPTTTPKACPQGFVLFEPT 221
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 121 PTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTV 249
PT+ T T ++TT T + +P T + T TN ST V TV
Sbjct: 361 PTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTV 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,287,223
Number of Sequences: 27780
Number of extensions: 269978
Number of successful extensions: 754
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -