Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_M24
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 34 0.82
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 34 0.82
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 34 0.82
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 34 0.82
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 34 0.82
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 34 0.82
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 34 0.82
CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein. 33 1.1
AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein. 33 1.1
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 33 1.4
M98776-1|AAB47721.1| 644|Homo sapiens keratin 1 protein. 33 1.9
BC063697-1|AAH63697.1| 644|Homo sapiens keratin 1 (epidermolyti... 33 1.9
BC047718-1|AAH47718.1| 86|Homo sapiens SUZ12P protein protein. 33 1.9
AF304164-1|AAG41947.1| 644|Homo sapiens keratin 1 protein. 33 1.9
AF237621-1|AAF60327.1| 644|Homo sapiens keratin 1 protein. 33 1.9
M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein. 32 2.5
M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein. 32 2.5
AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein. 32 2.5
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 32 3.3
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 32 3.3
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 32 3.3
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 32 3.3
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 32 3.3
BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein. 32 3.3
BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein. 32 3.3
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 32 3.3
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 32 3.3
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 32 3.3
X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting pr... 31 4.4
BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein pr... 31 4.4
BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein. 31 4.4
BC002914-1|AAH02914.1| 358|Homo sapiens WIPF1 protein protein. 31 4.4
AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protei... 31 4.4
AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein. 31 4.4
Y12059-1|CAA72780.1| 722|Homo sapiens HUNKI protein. 31 5.8
EF036485-1|ABO65071.1| 91|Homo sapiens SRp25 nuclear protein i... 31 5.8
BC091649-1|AAH91649.1| 550|Homo sapiens BRD4 protein protein. 31 5.8
BC067129-1|AAH67129.1| 548|Homo sapiens BRD4 protein protein. 31 5.8
BC047888-1|AAH47888.1| 548|Homo sapiens BRD4 protein protein. 31 5.8
BC038988-1|AAH38988.1| 549|Homo sapiens BRD4 protein protein. 31 5.8
BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein. 31 5.8
BC030158-1|AAH30158.1| 548|Homo sapiens BRD4 protein protein. 31 5.8
BC000156-1|AAH00156.1| 549|Homo sapiens Unknown (protein for IM... 31 5.8
AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion oncopro... 31 5.8
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 31 5.8
AC004798-1|AAC27978.1| 731|Homo sapiens R31546_1 protein. 31 5.8
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 7.6
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 898 GXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXSRGXXXGGRLG 743
G G GD G G G G G G G G GGG Y RG GG G
Sbjct: 431 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG-YGGDRGGGYGGDRG 481
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 898 GXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXSRGXXXGGRLG 743
G G GD G G G G G G G G GGG Y RG GG G
Sbjct: 434 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG-YGGDRGGGYGGDRG 484
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 898 GXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXSRGXXXGGRLG 743
G G GD G G G G G G G G GGG Y RG GG G
Sbjct: 434 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG-YGGDRGGGYGGDRG 484
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 33.9 bits (74), Expect = 0.82
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +2
Query: 656 HXLTPSNHXXVPLXPPXTXTDAXXPSVLXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
+ ++PS+ P PP P T + + AP TP P PPPPP
Sbjct: 1948 YPISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPP 2006
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 898 GXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXSRGXXXGGRLG 743
G G GD G G G G G G G G GGG Y RG GG G
Sbjct: 431 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG-YGGDRGGGYGGDRG 481
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 898 GXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXSRGXXXGGRLG 743
G G GD G G G G G G G G GGG Y RG GG G
Sbjct: 431 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG-YGGDRGGGYGGDRG 481
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.82
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = -2
Query: 898 GXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXSRGXXXGGRLG 743
G G GD G G G G G G G G GGG Y RG GG G
Sbjct: 434 GGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGG-YGGDRGGGYGGDRG 484
>CR536555-1|CAG38792.1| 316|Homo sapiens LOR protein.
Length = 316
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G GSG G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>AL161636-5|CAI19560.1| 312|Homo sapiens loricrin protein.
Length = 312
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G GSG G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 33.1 bits (72), Expect = 1.4
Identities = 16/49 (32%), Positives = 19/49 (38%)
Frame = +2
Query: 686 VPLXPPXTXTDAXXPSVLXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
VP PP P++L S P S + P P PPPPP
Sbjct: 334 VPPPPPNRMYPPPPPALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPP 382
>M98776-1|AAB47721.1| 644|Homo sapiens keratin 1 protein.
Length = 644
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXY 782
G G G G G G G G G G G G G GGG Y
Sbjct: 98 GFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGY 139
>BC063697-1|AAH63697.1| 644|Homo sapiens keratin 1 (epidermolytic
hyperkeratosis) protein.
Length = 644
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXY 782
G G G G G G G G G G G G G GGG Y
Sbjct: 98 GFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGY 139
>BC047718-1|AAH47718.1| 86|Homo sapiens SUZ12P protein protein.
Length = 86
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVXS 773
G G G G GSG G+G G GC GGG Y S
Sbjct: 7 GGGGGGGSGPSAGSGGGGFGGSAATASSGKSGGGGCGGGGSYSAS 51
>AF304164-1|AAG41947.1| 644|Homo sapiens keratin 1 protein.
Length = 644
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXY 782
G G G G G G G G G G G G G GGG Y
Sbjct: 98 GFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGY 139
>AF237621-1|AAF60327.1| 644|Homo sapiens keratin 1 protein.
Length = 644
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXY 782
G G G G G G G G G G G G G GGG Y
Sbjct: 98 GFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGY 139
>M94077-1|AAA36181.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G G+G G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGTGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>M61120-1|AAA36180.1| 316|Homo sapiens loricrin protein.
Length = 316
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G G+G G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGTGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>AB013076-1|BAA25794.1| 338|Homo sapiens loricrin protein.
Length = 338
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G G+G G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGTGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>BC108290-1|AAI08291.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G G G G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGGGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>BC034690-1|AAH34690.1| 316|Homo sapiens LOR protein protein.
Length = 316
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = -2
Query: 904 VRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGC--XGGGXYVXSRGXXXGGRLG 743
V+ G G G G G G G G G G GC GGG Y S G GG G
Sbjct: 17 VKTSGGGGGGGGGGGGGCGFFGGGGSGGGSSGSGCGYSGGGGY--SGGGCGGGSSG 70
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 25 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 79
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 31.9 bits (69), Expect = 3.3
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 907 GVRGXGXWGDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGGXYVX-SRGXXXGGRLG 743
G RG G G G G G G G G G G G GGG + +RG GG+ G
Sbjct: 22 GGRGGFGGGRGRGGGFRGRGRGGG-GGGGGGGGGGRGGGGFHSGGNRGRGRGGKRG 76
>X86019-1|CAA60014.1| 494|Homo sapiens SH3-domain interacting
protein protein.
Length = 494
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 883 GDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGG 788
G G G G+G G G G G G G GGG
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGG 95
>BX640870-1|CAE45928.1| 510|Homo sapiens hypothetical protein
protein.
Length = 510
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 883 GDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGG 788
G G G G+G G G G G G G GGG
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGG 95
>BC110288-1|AAI10289.1| 403|Homo sapiens WIPF1 protein protein.
Length = 403
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 883 GDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGG 788
G G G G+G G G G G G G GGG
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGG 95
>BC002914-1|AAH02914.1| 358|Homo sapiens WIPF1 protein protein.
Length = 358
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 883 GDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGG 788
G G G G+G G G G G G G GGG
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGG 95
>AF031588-1|AAC03767.1| 503|Homo sapiens WASP interacting protein
protein.
Length = 503
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 883 GDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGG 788
G G G G+G G G G G G G GGG
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGG 95
>AC010894-2|AAY14708.1| 503|Homo sapiens unknown protein.
Length = 503
Score = 31.5 bits (68), Expect = 4.4
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 883 GDXVGSGXXGWGXXGXLGXGXGXGVXGCXGGG 788
G G G G+G G G G G G G GGG
Sbjct: 64 GAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGG 95
>Y12059-1|CAA72780.1| 722|Homo sapiens HUNKI protein.
Length = 722
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>EF036485-1|ABO65071.1| 91|Homo sapiens SRp25 nuclear protein
isoform 3 protein.
Length = 91
Score = 31.1 bits (67), Expect = 5.8
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 189 SCSASTSSVLGASVALEASAHSG-RGRRQTKSVSSWRSGYHLKASQQTTSKS 37
+CSASTS AS A A S + RR+T+S SS S +S ++S S
Sbjct: 30 NCSASTSQGRKASTAPGAEERSXQKARRRTRSSSSSSSSXSSSSSSSSSSSS 81
>BC091649-1|AAH91649.1| 550|Homo sapiens BRD4 protein protein.
Length = 550
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>BC067129-1|AAH67129.1| 548|Homo sapiens BRD4 protein protein.
Length = 548
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>BC047888-1|AAH47888.1| 548|Homo sapiens BRD4 protein protein.
Length = 548
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>BC038988-1|AAH38988.1| 549|Homo sapiens BRD4 protein protein.
Length = 549
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>BC035266-1|AAH35266.1| 794|Homo sapiens BRD4 protein protein.
Length = 794
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>BC030158-1|AAH30158.1| 548|Homo sapiens BRD4 protein protein.
Length = 548
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>BC000156-1|AAH00156.1| 549|Homo sapiens Unknown (protein for
IMAGE:2900081) protein.
Length = 549
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>AY166680-1|AAO22237.1| 1846|Homo sapiens BRD4-NUT fusion
oncoprotein protein.
Length = 1846
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
>AC004798-1|AAC27978.1| 731|Homo sapiens R31546_1 protein.
Length = 731
Score = 31.1 bits (67), Expect = 5.8
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 668 PSNHXXVPLXPPXTXTDAXXPSV---LXXETSXXXXTPXSXIXAPXXTPXXPXPPPPP 832
P P PP T P+V L +T P + P P P PPP P
Sbjct: 217 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 274
>BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein.
Length = 189
Score = 30.7 bits (66), Expect = 7.6
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Frame = -2
Query: 892 GXWGDXVGSGXXGWGXXGXLGXGXGX-----GVXGCXGGGXYVXSRGXXXGGRLGX*DRR 728
G +G G G G G G G G G G G GGG SRG GG G ++
Sbjct: 52 GNFGGREGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG 111
Query: 727 XXSVGXGXXRG 695
G G G
Sbjct: 112 GGYGGGGGYDG 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,892,687
Number of Sequences: 237096
Number of extensions: 1998130
Number of successful extensions: 12744
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 7456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10763
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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