Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M24
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.72 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    24   1.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    24   1.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    24   1.7  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   3.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   3.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   3.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   3.8  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   3.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   3.8  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 800 TPXXPXPPPPPQXS 841
           TP  P PPPPP  S
Sbjct: 337 TPPKPAPPPPPPSS 350


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 224 AIAKCSEYLKEKKGEVIKEAVKRLIEN 304
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 224 AIAKCSEYLKEKKGEVIKEAVKRLIEN 304
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 224 AIAKCSEYLKEKKGEVIKEAVKRLIEN 304
           A+A   +   +K+ EVIK+ +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 133 RTQRTRTKANKVSLILAQWLSFESKSTNNIKIL 35
           RT+R R+K  K+   L+   ++ + + NN K L
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 133 RTQRTRTKANKVSLILAQWLSFESKSTNNIKIL 35
           RT+R R+K  K+   L+   ++ + + NN K L
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 133 RTQRTRTKANKVSLILAQWLSFESKSTNNIKIL 35
           RT+R R+K  K+   L+   ++ + + NN K L
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 133 RTQRTRTKANKVSLILAQWLSFESKSTNNIKIL 35
           RT+R R+K  K+   L+   ++ + + NN K L
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 133 RTQRTRTKANKVSLILAQWLSFESKSTNNIKIL 35
           RT+R R+K  K+   L+   ++ + + NN K L
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 133 RTQRTRTKANKVSLILAQWLSFESKSTNNIKIL 35
           RT+R R+K  K+   L+   ++ + + NN K L
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,703
Number of Sequences: 438
Number of extensions: 3692
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)