Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M19
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0037 - 604001-604957                                             34   0.17 
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    31   0.93 
11_04_0009 - 12132781-12133272                                         29   3.8  
03_02_0765 + 11000724-11002496                                         29   3.8  
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175...    29   6.6  

>09_01_0037 - 604001-604957
          Length = 318

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = +2

Query: 536 PPPXPXPXTAARGSPLYLKGLXGXPHPDPXTXD----XLWPXPXXTMP 667
           PPP P P   +    L L GL   PHPDP T       L P P   MP
Sbjct: 193 PPPPPPPPATSLSLSLSLPGL-DHPHPDPSTPSEPAVQLQPPPPSQMP 239


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 529 PHPPPXTXXXYRGPRIXPXPXGXXWAPPP*P 621
           P PPP        PRI P P G    PPP P
Sbjct: 280 PPPPPPNAPMGMPPRIPPPPVGGTQPPPPPP 310


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 222 RSSTWAREQRWSCSKPAPERRRRIGSLRNSVVSLCKFKRG 103
           R   W RE+R S  +  P +RRR+G  R      C    G
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRRGCGSGTCAESAG 147


>03_02_0765 + 11000724-11002496
          Length = 590

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 27/93 (29%), Positives = 29/93 (31%)
 Frame = -2

Query: 806 GAXGAXGXXGEXVGGXXGVMAGXXNGXXRXGRXXSXGVTEESVFLXXALXXGXWAKXHXX 627
           G  G  G  G  +GG  G   G   G    G     G       L      G  A     
Sbjct: 420 GGGGLGGGAGGGLGGGAGAGGGFGGGAGAGGGGGLGGGAGGGGGLDGGAGGGAEAGG--- 476

Query: 626 YXGQGGGAQXXPXGXGXIRGPRXXXXVLGGGXG 528
             G GGGA     G G + G       LGGG G
Sbjct: 477 --GFGGGAGAGTGGGGGLGGGAGGGGGLGGGAG 507


>02_01_0266 -
           1758439-1758599,1758682-1758769,1759363-1759564,
           1759664-1759800,1760169-1760268,1760350-1760522,
           1760797-1760941,1761018-1761139,1761225-1761470,
           1761962-1762182,1762278-1762338,1762409-1762487,
           1762572-1762651,1763221-1763292,1763382-1763449,
           1763550-1763588,1763828-1763903,1763992-1764006
          Length = 694

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -3

Query: 208 GSGAALVMLKASTRAKTKDRIFAKFSCKFM*IQTRTLRHKRRCTDHVDVHYXECR 44
           G  A+L ++K S R      I  + SC++  I      +KR+  D V VHY E R
Sbjct: 142 GKIASLTLMKDSERLDLLKEIGGETSCEWTFIHALLTANKRKQIDQV-VHYLEER 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,694,392
Number of Sequences: 37544
Number of extensions: 361482
Number of successful extensions: 1396
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)