Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_M17
(884 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 191 7e-49
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 190 1e-48
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 190 1e-48
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 188 5e-48
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 43 4e-04
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 35 0.075
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 29 6.6
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 6.6
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 191 bits (465), Expect = 7e-49
Identities = 93/188 (49%), Positives = 123/188 (65%)
Frame = +1
Query: 91 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 270
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 271 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 450
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 451 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVXVGHVDMTPDXLAQN 630
LLGP GKFP L++HQES+ K++E K T+KFQ+KKVLC+ V VG++ M + QN
Sbjct: 122 LLGP-----GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQN 176
Query: 631 VHLSINFL 654
+ +S+NFL
Sbjct: 177 IQMSVNFL 184
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 653 LVSLLKKHWQNVRSLHMKSTMGPPXRLY 736
LVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 184 LVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 190 bits (464), Expect = 1e-48
Identities = 92/188 (48%), Positives = 124/188 (65%)
Frame = +1
Query: 91 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 270
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 271 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 450
++VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 LKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 451 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVXVGHVDMTPDXLAQN 630
LLGP GKFP L++HQES+ K++E K T+KFQ+KKVLC+ V VG+ M + QN
Sbjct: 122 LLGP-----GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQN 176
Query: 631 VHLSINFL 654
V +S+NFL
Sbjct: 177 VQMSVNFL 184
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 653 LVSLLKKHWQNVRSLHMKSTMGPPXRLY 736
LVSLLKK+WQNVR L++KSTMG R++
Sbjct: 184 LVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 190 bits (463), Expect = 1e-48
Identities = 93/187 (49%), Positives = 123/187 (65%)
Frame = +1
Query: 94 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 273
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 274 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRL 453
+VC+LGD QH +EA+ + + M SE++IKQIPRL
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 140
Query: 454 LGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVXVGHVDMTPDXLAQNV 633
LGP GKFP L++HQES+ K++E K T+KFQ+KKVLC+ V VG++ M + QN+
Sbjct: 141 LGP-----GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNI 195
Query: 634 HLSINFL 654
+S+NFL
Sbjct: 196 QMSVNFL 202
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +2
Query: 653 LVSLLKKHWQNVRSLHMKSTMGPPXRLY 736
LVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 202 LVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 188 bits (458), Expect = 5e-48
Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 22/210 (10%)
Frame = +1
Query: 91 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 270
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 271 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 450
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 451 LLGPGLNKA----------------------GKFPGLLSHQESMTQKIDEVKGTIKFQMK 564
LLGPGLNKA GKFP L++HQES+ K++E K T+KFQ+K
Sbjct: 122 LLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLK 181
Query: 565 KVLCLSVXVGHVDMTPDXLAQNVHLSINFL 654
KVLC+ V VG+ M + QNV +S+NFL
Sbjct: 182 KVLCMGVAVGNCAMEEKQIFQNVQMSVNFL 211
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 653 LVSLLKKHWQNVRSLHMKSTMGPPXRLY 736
LVSLLKK+WQNVR L++KSTMG R++
Sbjct: 211 LVSLLKKNWQNVRCLYLKSTMGKVIRVF 238
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 42.7 bits (96), Expect = 4e-04
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 2/173 (1%)
Frame = +1
Query: 142 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 318
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
Query: 319 TLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP-GLNKAGKFPGL 495
+ L K + R+LGP GL K G
Sbjct: 338 AAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSK-VARILGPRGLMPNPKL-GS 395
Query: 496 LSHQESMTQKIDEVKGTIKFQMKKVLCLSVXVGHVDMTPDXLAQNVHLSINFL 654
+++ S K + G + F++ K + V +G ++ + + L +N+ ++ L
Sbjct: 396 VTNDVSGAVKAAK-SGRVDFKIDKTAIVHVGLGKINFSDENLRENIGAFVHAL 447
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 35.1 bits (77), Expect = 0.075
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 67 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 243
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 244 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 339
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 568 PSSFGT*WFP*LHQSSASWTPGGREDQGIYQLCSNR 461
P F WFP +H ++ S R Q I+ +C N+
Sbjct: 493 PVYFKNDWFPFIHSTTLSEGTNARRRQDIFGVCCNK 528
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 241 QCRRNACPSVGHSSSDQFEALQSPKS 164
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,421,045
Number of Sequences: 37544
Number of extensions: 421384
Number of successful extensions: 1032
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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