Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M16
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844...    36   0.032
01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855     34   0.17 
02_01_0262 - 1734447-1735090,1735219-1735367,1735458-1735633,173...    31   0.91 
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242           29   6.4  

>04_04_0407 -
           24983491-24983575,24983655-24984015,24984367-24984406,
           24984466-24984468
          Length = 162

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +3

Query: 696 KALKAQRKVVKGEHGKRVRKIRNSVHFRRTXXFEPPKHPKYQRKS 830
           +ALKA + V  G   K  +KIR SV F R    +  + PKY R S
Sbjct: 26  QALKAAKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVS 70


>01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855
          Length = 152

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 696 KALKAQRKVVKGEHGKRVRKIRNSVHFRRTXXFEPPKHPKYQRKS 830
           +ALK  + V  G   ++ +KIR SV F R    +  + PKY R S
Sbjct: 16  QALKVAKAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVS 60


>02_01_0262 -
           1734447-1735090,1735219-1735367,1735458-1735633,
           1735719-1735853,1737039-1737120,1737307-1737461
          Length = 446

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
 Frame = +3

Query: 699 ALKAQR--KVVKGEHGKRVRKIRNSVHFRRTXXFEPPKHP----KYQRKSWLKKSHG 851
           ALKA     VV G+    V  IR+ V  +RT   E  +HP    K   KSW++K HG
Sbjct: 373 ALKADHVYHVVSGQKDLHVTGIRDLVRQKRTFH-EVGEHPAPIDKSDTKSWIRKRHG 428


>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
          Length = 417

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 194 VSQNTGTCPESSCACPETSC 253
           ++++  TCP + C CPE  C
Sbjct: 116 ITEHEKTCPHAPCFCPEPGC 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,383,639
Number of Sequences: 37544
Number of extensions: 171692
Number of successful extensions: 468
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)