Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M15
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1775 + 29431106-29431193,29431290-29431329,29431620-294320...    30   2.8  
06_01_0179 - 1388602-1389572,1390060-1390129,1390346-1390439,139...    28   8.7  

>07_03_1775 +
           29431106-29431193,29431290-29431329,29431620-29432080,
           29432173-29432363,29432503-29432635,29432839-29433428
          Length = 500

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 680 LLYRENPSXSVPHRHPQTWRNH*SSSCPKDSPLPNRLCPXTX*FAPVXTSFP-LILVP-S 853
           LL  E+P  + PH H +   +H ++  P  SP P+   P T   AP  ++ P  I +P S
Sbjct: 67  LLLEESPKQAPPHHHNRHGGHHRAAHTPAPSPAPSP-SPFT---APPKSASPAAITIPIS 122

Query: 854 PKFNDPLKSS 883
           P    P   S
Sbjct: 123 PSTPQPKAES 132


>06_01_0179 -
           1388602-1389572,1390060-1390129,1390346-1390439,
           1390587-1390687,1391152-1391220,1391328-1391482,
           1392193-1392241,1392611-1392739,1392825-1393580,
           1394711-1394902
          Length = 861

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 689 RENPSXSVPHRHPQTWR 739
           R NPS +VPH  P +WR
Sbjct: 347 RGNPSGAVPHTAPDSWR 363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,970,546
Number of Sequences: 37544
Number of extensions: 559940
Number of successful extensions: 1407
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)