Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M14
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0227 - 1663375-1665405                                           30   2.5  
07_01_0229 - 1672126-1673976,1674427-1675404                           29   5.7  
12_02_0335 - 17669232-17670063,17670619-17672150                       28   10.0 

>07_01_0227 - 1663375-1665405
          Length = 676

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 296 FGMHIPPTIIDPSGQLPELRTYSTRP 219
           FG++IP  IIDP+ +LP+L   S RP
Sbjct: 263 FGLNIPAPIIDPT-KLPKLPNLSPRP 287


>07_01_0229 - 1672126-1673976,1674427-1675404
          Length = 942

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 296 FGMHIPPTIIDPSGQLPELRTYSTRP 219
           FG++IP  IIDP+ +LP+L   S +P
Sbjct: 266 FGLNIPAPIIDPT-KLPKLPNLSPKP 290


>12_02_0335 - 17669232-17670063,17670619-17672150
          Length = 787

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 253 NCLNLEHIRLAPVELFPKNAAVFEIIDDLEPAIK 152
           +C NL HIR+ P E   K+   + + DDLE  +K
Sbjct: 24  SCPNLMHIRVKPEE---KDGRCYPVEDDLEQLLK 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,029,326
Number of Sequences: 37544
Number of extensions: 255223
Number of successful extensions: 498
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)