Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M14
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.47 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   4.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.8  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   7.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -1

Query: 611  YTKDHT*LVNXKVHLINVIKRYVNYALQV 525
            YTKD T + +    +++ +K+Y NY++QV
Sbjct: 1129 YTKD-TKITSSSETILHGLKKYTNYSMQV 1156


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 229 RLAPVELFPKNAAVFEIIDDLEPAIKLRLSSTDT 128
           R+ P EL+ ++  V EI D+LE ++   LSS  T
Sbjct: 250 RITP-ELYSEHLVVPEIEDNLETSLFRPLSSEAT 282


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 304 FSILGCTYLQP*LIPRGN 251
           F   GC + Q  LIP+GN
Sbjct: 576 FDFCGCGWPQHMLIPKGN 593


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 423 GNRLHIYVYETITNVLLLFIYFYIICW 503
           G    +   +TIT +L   +  + ICW
Sbjct: 247 GETKQVQSRKTITRMLSAVVITFFICW 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,905
Number of Sequences: 438
Number of extensions: 3167
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)