Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M12
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81071-5|CAB03011.1|  200|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z81517-3|CAB04210.1|  802|Caenorhabditis elegans Hypothetical pr...    29   3.3  

>Z81071-5|CAB03011.1|  200|Caenorhabditis elegans Hypothetical
           protein F28F8.5 protein.
          Length = 200

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 328 GN*SNARCRYSNGGTCSTNKTDEDGCEVP*YLCDTLTRLL*RMCEML-QTNLKKP 489
           G+  N   R  N G  STN+ DE+  E P YL D +  L+   C++L   ++K P
Sbjct: 54  GSIENDERRMRNDGAGSTNEDDEEPIE-PTYLGDAIDSLMMHWCQLLTNVSVKAP 107


>Z81517-3|CAB04210.1|  802|Caenorhabditis elegans Hypothetical
           protein F28B1.3 protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 429 YAHTAIVAHVRNAANKSQEANFRVLLPEHSFHQRICYDSGWKILQSVRQRKERGCSNI 602
           +A + I+AH  +    S  +  R   P+ +    +C DSGW+I     Q  E  C+++
Sbjct: 181 FAVSGILAHYADFFPYSALSVLRGFYPDLTLVTAVCVDSGWQINGVKVQNPEVTCNSV 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,744,319
Number of Sequences: 27780
Number of extensions: 416438
Number of successful extensions: 1017
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)