Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M10
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0123 + 896128-896429,896578-896608,896903-896995,897096-89...    30   2.8  
12_01_0513 + 4059586-4059620,4060155-4060365,4060470-4060724,406...    28   8.5  

>02_01_0123 +
           896128-896429,896578-896608,896903-896995,897096-897158,
           897279-897390,897947-898032,898845-898903,898990-899092,
           899182-899242,899472-899554,899635-899715,900018-900077
          Length = 377

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 589 NKMDYVKMMDGCLDEKICYNYGIIKENEQIRNVRQLFQFPDLPQQRRQNCL 741
           N   Y    D  +D  I     + ++ ++++  R    FPDLP++RR + L
Sbjct: 106 NISSYKGSSDEFIDANIQLALAVARKLKELKGTRSCIVFPDLPEKRRASQL 156


>12_01_0513 +
           4059586-4059620,4060155-4060365,4060470-4060724,
           4060801-4060865,4061120-4061194,4061440-4061575,
           4061661-4061753,4061838-4061983,4062074-4062174,
           4062259-4062434,4063823-4063900,4063991-4064199,
           4064286-4064378,4064888-4064971,4065405-4065506,
           4065591-4065678,4065756-4065809,4065869-4066075,
           4066970-4067026,4067171-4067225,4067737-4067813,
           4067941-4068007,4068383-4068444,4068541-4068603,
           4068702-4068830
          Length = 905

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 120 TVPEFKTTPVDAAFVEKQKKILSLFY--NVNEINYEAEYYKVAQDFNIEASKDCYTNMKA 293
           T+  +K T  + A+VE +K++++  Y   + E NY +E+  + +   I+  K     +  
Sbjct: 403 TLINYKVTFENLAYVEAKKRLVNGKYPEKILEWNYNSEH--MIRGLIIDKKKGNIIKVDH 460

Query: 294 YENFMMMYKG 323
           Y N  M Y G
Sbjct: 461 YNNVKMSYHG 470


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,696,538
Number of Sequences: 37544
Number of extensions: 391911
Number of successful extensions: 948
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)