Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_M06
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 250 1e-66
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 250 1e-66
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 1.4
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 1.4
U58751-10|AAB00661.1| 205|Caenorhabditis elegans Hypothetical p... 28 10.0
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 250 bits (612), Expect = 1e-66
Identities = 112/189 (59%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Frame = +3
Query: 144 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 323
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 324 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 500
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 501 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 680
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 681 LXADWDFLP 707
L DWD LP
Sbjct: 191 LEEDWDLLP 199
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 712 KKIXDPEAQXPXHWG*QAHYSRPPKTKSPXIGTSPEHLPRSRCPPXPEXW 861
KKI DP+A+ P W + Y + P PEH+P PE W
Sbjct: 201 KKIKDPDAKKPEDWD-EREYIDDAEDAKPEDWEKPEHIPDPDA-KKPEDW 248
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 250 bits (612), Expect = 1e-66
Identities = 112/189 (59%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
Frame = +3
Query: 144 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 323
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 324 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPD 500
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 501 ICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 680
ICGP T++VHVI +YKG+N LIKK+I CK D THLYTLI+ DNTYEV ID E ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 681 LXADWDFLP 707
L DWD LP
Sbjct: 191 LEEDWDLLP 199
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 712 KKIXDPEAQXPXHWG*QAHYSRPPKTKSPXIGTSPEHLPRSRCPPXPEXW 861
KKI DP+A+ P W + Y + P PEH+P PE W
Sbjct: 201 KKIKDPDAKKPEDWD-EREYIDDAEDAKPEDWEKPEHIPDPDA-KKPEDW 248
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 94.3 bits (224), Expect = 1e-19
Identities = 55/152 (36%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Frame = +3
Query: 276 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 446
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 447 EQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCK----------DDV 596
+ + +T Y IMFGPD CG T KVH+IF YK + + DD
Sbjct: 167 DLANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDH 225
Query: 597 YTHLYTLIVKPDNTYEVLIDNEKVESGDLXAD 692
THL+TL+VKP Y V +D + + G++ +D
Sbjct: 226 NTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSD 257
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 552 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVESGDLXA 689
K I+K++ C+D THL L D+TY V ++ NE+V++ A
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDNSTALA 12900
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 552 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNEKVESGDLXA 689
K I+K++ C+D THL L D+TY V ++ NE+V++ A
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDNSTALA 12900
>U58751-10|AAB00661.1| 205|Caenorhabditis elegans Hypothetical
protein C07G1.7 protein.
Length = 205
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 431 DLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPR 309
D E + +L D ++DY+ F + E+F G+S+ R
Sbjct: 130 DRETCEENIKILQREDRDVDYREFLTMAEKFNEEGQSLWAR 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,733,096
Number of Sequences: 27780
Number of extensions: 476229
Number of successful extensions: 1412
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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