Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M05
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0981 - 33278735-33278746,33278882-33279022,33279145-332791...   173   1e-43
07_03_0244 - 15715047-15715163,15716672-15716824,15718629-157187...    29   5.1  
02_04_0332 + 22093387-22093550,22093753-22094056                       29   6.7  

>02_05_0981 -
           33278735-33278746,33278882-33279022,33279145-33279199,
           33279787-33279950,33280043-33280139,33280507-33280678,
           33281107-33281182,33281545-33281661,33281928-33282007,
           33282225-33282398,33282636-33282765,33282855-33282941,
           33283039-33283302,33284131-33284256
          Length = 564

 Score =  173 bits (422), Expect = 1e-43
 Identities = 84/217 (38%), Positives = 130/217 (59%), Gaps = 7/217 (3%)
 Frame = +2

Query: 215 VIAIRREDQSVWERRAPFSPSNVKSLVREGVK-------VIVQPSNRRAYPMQSYINAGA 373
           V+ I  E  ++WERRAP +PS+   L+  G K       +IVQPS +R +    Y + G 
Sbjct: 52  VVGILAETANMWERRAPLTPSHCARLLLGGGKRGTGVNRIIVQPSTKRIHHDAQYEDVGC 111

Query: 374 IVQEDISEASVIFGVKQTPIDLLIPNKTYCFFSHTIKAQEANMPMLDAMLAKNIRLIDYE 553
            + +D+SE  +I G+KQ  +++++P++ Y FFSHT KAQ+ NMP+LD +L K + L DYE
Sbjct: 112 EISKDLSECGLIIGIKQPKLEMILPHRAYGFFSHTHKAQKENMPLLDEILEKRVSLFDYE 171

Query: 554 KLMDDKGNRVVAFGKYAGVAGMVNIXXXXXXXXXXXXXXTPFMHIGPAHNYRNSSMARQA 733
            +  D G R++AFGK+AG AG+++               TPF+ +G +H Y + + A+ A
Sbjct: 172 LIAGDDGKRLLAFGKFAGRAGLIDFLHGLGQRYLSLGYSTPFLSLGQSHMYPSLAAAKAA 231

Query: 734 IRDAGYXVALXMMPKSLGPPTFVFTGSGNVSQGXKNL 844
           +   G  +A   +P  + P  FVFTG+GNVSQG + +
Sbjct: 232 VIAIGEEIATFGLPSGICPIVFVFTGTGNVSQGAQEI 268


>07_03_0244 - 15715047-15715163,15716672-15716824,15718629-15718748,
            15718830-15719045,15719902-15719968,15720051-15720125,
            15720607-15720698,15721053-15721154,15721642-15721711,
            15721788-15721846,15721947-15722031,15722443-15722520,
            15722627-15722725,15722819-15722910,15725572-15725661,
            15725937-15725995,15727966-15728281,15728627-15728702,
            15729998-15730308,15730577-15730634,15731082-15731092,
            15731247-15731397,15733372-15733778
          Length = 967

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 672  VWCPRANSLRPSPCRMFTIPATPAYF 595
            +WCP  ++L P PC +F  P + AYF
Sbjct: 932  LWCPLWHTLIPKPCLVFLSPWS-AYF 956


>02_04_0332 + 22093387-22093550,22093753-22094056
          Length = 155

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +1

Query: 469 LSYNQGTGSQHANVGCYAGKEH----SFNRLREVDGRQGESGSRLREVRRSCRNGEHSAR 636
           ++Y++GTG Q  + GC +  E       +  R+VDG   ++GS  R          H+ R
Sbjct: 1   MTYSRGTGCQANDAGCASSHERRQRAGRSCARDVDGMGYDTGSIPRFA------SSHARR 54

Query: 637 TRSQAIGSRTP 669
            R  A+G+  P
Sbjct: 55  WRRTAVGAWLP 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,374,126
Number of Sequences: 37544
Number of extensions: 496900
Number of successful extensions: 1321
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)