Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_M04
(878 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1840.06 |atp5||F0-ATPase delta subunit|Schizosaccharomyces p... 97 4e-21
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 29 1.2
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 28 2.0
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 6.1
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 26 6.1
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 26 8.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 26 8.1
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 8.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 8.9
>SPCC1840.06 |atp5||F0-ATPase delta subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 216
Score = 96.7 bits (230), Expect = 4e-21
Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
Frame = +2
Query: 119 NIFLNKI-MSALKGNLLVRSLSTSVASAQMVKPPVQVFGLEGRYASALFSAASKTKALDI 295
+IF I ++A +L +RSL+T+ ASA PPVQ++GL+G YAS+L++AA K LD
Sbjct: 3 HIFRRSIPITARLPSLGIRSLATATASAH---PPVQLYGLDGSYASSLYTAAVKESKLDN 59
Query: 296 VEKELCQFQQSIKTDAKLKEFIINPTIKRSMKVDALKHVANXISLSPTTGNLLGLLAENG 475
VEK L + ++ + +++I +P + R K + + P N +L +N
Sbjct: 60 VEKALNKLSGVLQQRPEFEQYISSPWLTREDKKILVSSLTQMTGNEPLLKNFYNVLLDNH 119
Query: 476 RLGKLEAVINAFKIMMAAHRGEVACEVVTAKPLDQAQRQNXEXAXKKFXKGHETVXLTAX 655
RL L + F +M A RGE+ ++ +A PLD E K G + ++
Sbjct: 120 RLYLLTRIQKQFSTLMRAKRGEIEVKITSATPLDSKILSRLESRIAKSKYGKGKLLVSNK 179
Query: 656 VDPSLXGWXGCXQLGINISXXSV 724
V PS+ G ++G NI SV
Sbjct: 180 VTPSIIGGL-IVEIGDNILDVSV 201
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +2
Query: 731 NGXXXXXPPPPXPXPXPXSXGPRXL-PLXRAXRXPTLIXSPPXNSXQPPP 877
NG PPP P P + G L P R+ P S P QPPP
Sbjct: 329 NGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 571 WFGCNNFTSYFTPVRSHHNLKSINDSLQFPQATI 470
W G +F + F + +H + S+N L F QA I
Sbjct: 261 WLGPEHFLNEFFTLNTHQKVSSLNYHLAFQQARI 294
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 8 NYHSL*GILKI*LDLRALARNIWSIKPKV*KILLTCANIFLNKIMSALKGNLLVRSLSTS 187
+Y ++ G+ L ++R +WSI K K + +N+ ++ AL NLL S
Sbjct: 720 DYDTVIGVAIKNLSQSIVSRGLWSIDSKESKNMHISSNVVASEAPDALAANLLAMYESNP 779
Query: 188 VASAQM 205
SA++
Sbjct: 780 KKSAKV 785
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -3
Query: 408 CFNASTFMLLFIVGLMMNSLSF-ASVLID 325
C F+LL GL+MN L+F ASV+++
Sbjct: 1296 CITRVYFLLLKACGLIMNGLNFEASVMLE 1324
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 513 LKALMTASSFPKRPFSASNPSRLPVVG 433
L +T + P++PFS S+P+ P +G
Sbjct: 233 LNQALTLINLPEQPFSISSPTATPQLG 259
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 25.8 bits (54), Expect = 8.1
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 290 DIVEKELCQFQQSIKTDA-KLKEFII--NPTIKRSMKV-DALKHVANXISLSPTTGNLLG 457
D + K++ ++ SI ++ L E I+ +P I +S V DA H+++ +SP NL
Sbjct: 144 DTISKQMVKWCGSISLESIVLVEGIVKKSPEIIKSATVQDAEIHISSIYVISPIKKNLPF 203
Query: 458 LLAENGR 478
L+ + GR
Sbjct: 204 LVEDAGR 210
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/46 (28%), Positives = 17/46 (36%)
Frame = +2
Query: 734 GXXXXXPPPPXPXPXPXSXGPRXLPLXRAXRXPTLIXSPPXNSXQP 871
G PPPP P P P + PT++ S N +P
Sbjct: 106 GPPSQLPPPPQPQSHPNVTVISASPARAIEQQPTILSSTDSNIPRP 151
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 227 FGLEGRYASALFSAASKTKALDIVEKELCQFQQSIKTDAKLKEFIINPTIK 379
+G E + A K+ D ++KEL +S+K+ A+ I++ I+
Sbjct: 602 YGEEDPDVIVCYIGADDGKSPDQIQKELADLAESVKSSAEASAKIVSEIIQ 652
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = +2
Query: 701 INISXXSVARNGXXXXXPPPPXPXP 775
+NI + G PPPP P P
Sbjct: 928 VNIVANDTSVAGVMPAFPPPPPPPP 952
Score = 21.0 bits (42), Expect(2) = 8.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 752 PPPPXPXPXPXSXG 793
PPPP P P + G
Sbjct: 946 PPPPPPPPLVSAAG 959
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,166,660
Number of Sequences: 5004
Number of extensions: 62837
Number of successful extensions: 175
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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