Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_M02
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    45   3e-06
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    45   3e-06
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    45   3e-06
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    45   3e-06
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    41   4e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   0.54 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   3.9  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   3.9  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = +2

Query: 464 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSL 568
           HYT G E+VD VLD +RK  + C  LQGF + HSL
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSL 35


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = +2

Query: 464 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSL 568
           HYT G E+VD VLD +RK  + C  LQGF + HSL
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSL 35


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = +2

Query: 464 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSL 568
           HYT G E+VD VLD +RK  + C  LQGF + HSL
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSL 35


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = +2

Query: 464 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSL 568
           HYT G E+VD VLD +RK  + C  LQGF + HSL
Sbjct: 1   HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSL 35


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 26/68 (38%), Positives = 28/68 (41%)
 Frame = +3

Query: 201 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 380
           P    T WS AS+   RCP+TR S      ST SS R   AST PV              
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78

Query: 381 XXAHTDSC 404
             A T SC
Sbjct: 79  APARTASC 86



 Score = 36.7 bits (81), Expect = 0.001
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 143 KCVSASLXHVGQAGVQIGNACWE 211
           +C+S    HVGQAGVQIGN CW+
Sbjct: 3   ECISV---HVGQAGVQIGNPCWD 22


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect(2) = 0.54
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 252 CPQTRPSGVETILSTLSSARPELAS 326
           C   RPS ++   ++ S  RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188



 Score = 21.8 bits (44), Expect(2) = 0.54
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 195 VMPAGSFTAWSTASSLMARCPQTRPSGV 278
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 126 EKNSNQNA*VHLXYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSS 305
           +KN+ + A + L YT   P+S  +  + S      + S+M R         E  L+T  S
Sbjct: 276 DKNNPRLALIFLGYTTPPPDSDGIKYSDSLLGQLLSLSIMPRNHNGPYEYYENPLTTNRS 335

Query: 306 ARPELAS 326
           A   L+S
Sbjct: 336 AVDSLSS 342


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 236 GCRAPGSKAPSRHYRSGLRLGQRVXEMHSR 147
           G  APGS+   RH R+G +  + + E++ +
Sbjct: 32  GSPAPGSRHSIRHGRNGDKRSRMIKELYQQ 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 854,446
Number of Sequences: 2352
Number of extensions: 16953
Number of successful extensions: 36
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)