Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L21
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 140 6e-33
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 140 6e-33
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 140 6e-33
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 130 5e-30
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 88 4e-17
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 88 4e-17
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 40 0.009
BC098569-1|AAH98569.1| 757|Homo sapiens hypothetical protein FL... 30 10.0
BC043210-1|AAH43210.1| 334|Homo sapiens FLJ22374 protein protein. 30 10.0
AK026027-1|BAB15327.1| 456|Homo sapiens protein ( Homo sapiens ... 30 10.0
AK000039-1|BAA90898.1| 378|Homo sapiens protein ( Homo sapiens ... 30 10.0
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 25 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 84
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 85 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 120
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAK 23
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 128 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 169
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 140 bits (339), Expect = 6e-33
Identities = 61/96 (63%), Positives = 76/96 (79%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVVRCE INISGNF+RNKLK ++FLRK N NP+RGP+HFRAPS+I W+TVR
Sbjct: 27 VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 130 bits (315), Expect = 5e-30
Identities = 57/96 (59%), Positives = 73/96 (76%)
Frame = +2
Query: 179 LLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKXCNVNPARGPFHFRAPSKILWKTVRX 358
+L G KVVVV CE INISGNF+RNKL ++FLRK N +P+RGP+HFRAPS++ W+TVR
Sbjct: 27 VLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNTSPSRGPYHFRAPSRVFWRTVRG 86
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+PHKT RG AL L G PPP+D ++ +V+PA
Sbjct: 87 MLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPA 122
Score = 38.7 bits (86), Expect = 0.028
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +1
Query: 112 KAIVIDGRGHLLGRLAAVIAK 174
+ +V+DGRGHLLGRLAA++AK
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAK 25
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 130 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 171
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 88.2 bits (209), Expect = 4e-17
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2
Query: 287 NVNPARGPFHFRAPSKILWKTVRXMIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
N NP+RGP+HFRAPS+I W+TVR M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Score = 37.1 bits (82), Expect = 0.087
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE ++K + KI Y K
Sbjct: 69 KPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKA--KIHYRKK 110
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 88.2 bits (209), Expect = 4e-17
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2
Query: 287 NVNPARGPFHFRAPSKILWKTVRXMIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
N NP+RGP+HFRAPS+I W+TVR M+PHKT RG AL L + G PPP+D ++ +V+PA
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Score = 37.9 bits (84), Expect = 0.050
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 489 KXGRNYCHVSXLSHEIGWKYRDVVPKLEKQKKGQGVKKIAYXXK 620
K R + ++ L+HE+GWKY+ V LE+++K + KI Y K
Sbjct: 69 KPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA--KIHYRKK 110
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 40.3 bits (90), Expect = 0.009
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 359 MIPHKTXRGXNALXXLXTYXGWPPPFDXRRXVVMPA 466
M+ HKT RG +L L + G PPP+D ++ +V+PA
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPA 36
>BC098569-1|AAH98569.1| 757|Homo sapiens hypothetical protein
FLJ22374 protein.
Length = 757
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -1
Query: 306 PRAGFTLHXLRRNDISLSLFL-----KKLPEILICSQR---TTTTLFPSRRTLGDDCRQT 151
P+ F H LRR+ S S +K+PE+ +C+Q+ ++ PSR +LG T
Sbjct: 220 PQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELT 279
Query: 150 AQ-QMTTA 130
+ Q TTA
Sbjct: 280 VERQKTTA 287
>BC043210-1|AAH43210.1| 334|Homo sapiens FLJ22374 protein protein.
Length = 334
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -1
Query: 306 PRAGFTLHXLRRNDISLSLFL-----KKLPEILICSQR---TTTTLFPSRRTLGDDCRQT 151
P+ F H LRR+ S S +K+PE+ +C+Q+ ++ PSR +LG T
Sbjct: 220 PQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELT 279
Query: 150 AQ-QMTTA 130
+ Q TTA
Sbjct: 280 VERQKTTA 287
>AK026027-1|BAB15327.1| 456|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22374 fis, clone HRC06766. ).
Length = 456
Score = 30.3 bits (65), Expect = 10.0
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = -1
Query: 306 PRAGFTLHXLRRNDISLSLFL-----KKLPEILICSQR---TTTTLFPSRRTLGDDCRQT 151
P+ F H LRR+ S S +K+PE+ +C+Q+ ++ PSR +LG T
Sbjct: 220 PQDSFHRHYLRRSSPSSSSTQPQEESRKVPELFVCTQQDILASSNSSPSRTSLGQLSELT 279
Query: 150 AQ-QMTTA 130
+ Q TTA
Sbjct: 280 VERQKTTA 287
>AK000039-1|BAA90898.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ20032 fis, clone ADSU02205. ).
Length = 378
Score = 30.3 bits (65), Expect = 10.0
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 342 HRILDGALKWKGPRAGFTLHXLRRNDISLSLFLKKLPEILICSQRTTTTLFPSRRTL-GD 166
H + G ++ K PR L+RN+ SL L+ P + S R T+ + + G
Sbjct: 183 HYLKPGWIELKAPRFHQAESHLKRNEASLPSILQYQPNL---SNRMTSKQYTGNSNMPGG 239
Query: 165 DCRQTAQQMTTAIDH 121
RQ Q TT ++H
Sbjct: 240 LPRQAYTQKTTQLEH 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,956,549
Number of Sequences: 237096
Number of extensions: 2347428
Number of successful extensions: 11290
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11254
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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