Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP14_F_L17
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   0.96 
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225           31   0.96 
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    28   9.0  
02_04_0400 - 22608519-22608844,22609044-22609122                       28   9.0  
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319...    28   9.0  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +2

Query: 761 PXPPXEXGXXXXXAPPXXXPPPXXPXXPXXXXXXXXXFXPPP 886
           P PP   G     +PP   PPP  P  P           PPP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590


>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
          Length = 467

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
 Frame = +2

Query: 710 GSGGGGGXXFXXXXXXXPXPP-XEXGXXXXXAPPXXXPPPXXP 835
           G GGGGG  F       P PP          A P   PPP  P
Sbjct: 20  GGGGGGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPPPP 62



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/42 (33%), Positives = 14/42 (33%)
 Frame = +2

Query: 710 GSGGGGGXXFXXXXXXXPXPPXEXGXXXXXAPPXXXPPPXXP 835
           G GGGGG          P  P   G      P    PPP  P
Sbjct: 22  GGGGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPPPPP 63


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 167 PKEDNSLNTLAESAKKTIEELREKVE 244
           PKE ++  T+A + +KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/56 (28%), Positives = 17/56 (30%)
 Frame = -3

Query: 885 GGGXXXXXXXXXXXGXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPP 718
           GGG           G  G  GGG   GG          GG G +        PP P
Sbjct: 51  GGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPGP 106


>01_05_0679 +
           24230740-24230929,24231330-24231461,24231710-24231977,
           24232170-24232388,24233538-24233673,24233899-24234147,
           24234783-24235100
          Length = 503

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +2

Query: 200 ESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 334
           E A+K  E L+  +K   +L PE +K+ F +++ +F +F   L+P E
Sbjct: 259 EEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,982,935
Number of Sequences: 37544
Number of extensions: 430314
Number of successful extensions: 2885
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2635
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)