Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L17
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.65
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 31 1.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.0
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 3.5
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 843 GXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPPPEP 709
G G GG GG S GG G PPPPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 843 GXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPPPEP 709
G G GGG GG+ S GG PPPPP P
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 843 GXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPPPEP 709
G G GG GG S GG G PPPPP P
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -3
Query: 843 GXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPPPEP 709
G G GGG GG+ S GG PPPPP P
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP 312
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 167 PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 334
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 761 PXPPXEXGXXXXXAPPXXXPPPXXPXXPXXXXXXXXXFXPPP 886
P P E APP PPP P P PPP
Sbjct: 176 PIAPSELNVQVKRAPPQGPPPPPPPQAPADIDYPERLMSPPP 217
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 710 GSGGGGGXXFXXXXXXXPXPPXEXGXXXXXAPPXXXPPP 826
G GGGGG P PP G APP PPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCG----CAPPPPPPPP 58
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -3
Query: 825 GGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPPPEP 709
GGG GG + GG + PPPPP P
Sbjct: 34 GGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPP 72
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 843 GXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXPPPPPEP 709
G G GGG GG GG G PPPPP P
Sbjct: 32 GGGGGCGGGGGCGGGCGYG---GGGGCGYGGGYGCGIPPPPPPPP 73
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 173 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 343
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 173 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 343
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Frame = -3
Query: 843 GXXGXXGGGXXXGGAXXXXXPFSXGGXGXFXXXXXKXXP-----PPPPEP 709
G G GGG GG ++ GG G F PPPP P
Sbjct: 114 GGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPPAP 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,661,360
Number of Sequences: 27780
Number of extensions: 306893
Number of successful extensions: 1370
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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