Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L14
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 28 7.1
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z92838-2|CAB07408.1| 211|Caenorhabditis elegans Hypothetical pr... 28 9.4
U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein. 28 9.4
U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein ... 28 9.4
AL032663-9|CAA21764.2| 187|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z93389-1|CAB07668.1| 346|Caenorhabditis elegans Hypothetical
protein T13F3.1 protein.
Length = 346
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -1
Query: 594 FNFHVDKILRIS-FVWSR*NEAGGVRALDNSYVVGV*EHSLVHVDSGVACCFVETFKIFG 418
++ +D I+ I+ FVW R NE GV+ L+ +G+ LV + S + T +
Sbjct: 171 YDLKIDDIVYIAAFVWPR-NETTGVKYLNKRSAIGIGFDQLVVIISLTVIAYCGTCCYYK 229
Query: 417 IIEQL 403
I +Q+
Sbjct: 230 IQQQM 234
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 97 RGLLPSLSVAPYLNSKRHRVDAAFVEKQKKILSLFYNVNEISYEAEYYKVAQDFNIEASK 276
R L + VA +S ++++ A ++ +ILSL+ VN + EY + +EA++
Sbjct: 1797 RNLTTDIKVADVSDSIQNQLIDAMLDA--RILSLYEKVNNLRTSEEYGLIRGKMFVEAAE 1854
Query: 277 DCYTNMKAYE 306
C+ A +
Sbjct: 1855 LCFIYKSAIQ 1864
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +1
Query: 97 RGLLPSLSVAPYLNSKRHRVDAAFVEKQKKILSLFYNVNEISYEAEYYKVAQDFNIEASK 276
R L + VA +S ++++ A ++ +ILSL+ VN + EY + +EA++
Sbjct: 1797 RNLTTDIKVADVSDSIQNQLIDAMLDA--RILSLYEKVNNLRTSEEYGLIRGKMFVEAAE 1854
Query: 277 DCYTNMKAYE 306
C+ A +
Sbjct: 1855 LCFIYKSAIQ 1864
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -1
Query: 429 KIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHEIF--VGFH 292
+I+G RDG F HF V K +E +Q LG ++ V H E+F V +H
Sbjct: 424 RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDELFDLVAYH 471
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -1
Query: 429 KIFGIIEQLEQRDGFFPHFFV-KDRE-FQILGKESDLVHHHEIF--VGFH 292
+I+G RDG F HF V K +E +Q LG ++ V H E+F V +H
Sbjct: 424 RIWGYTVSYASRDGSFKHFLVEKIKEGYQFLG--TNQVVHDELFDLVAYH 471
>Z92838-2|CAB07408.1| 211|Caenorhabditis elegans Hypothetical
protein T03D8.3 protein.
Length = 211
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 303 VGFHVCVAVLAGLDVEVLGDFVVLSFIADLVNVVEK 196
V F V VA + GLD+E GDFV+ S D ++++ +
Sbjct: 8 VFFTVGVAAIYGLDLENAGDFVLPS--GDFIDLISR 41
>U58086-1|AAC47123.1| 803|Caenorhabditis elegans CUL-4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 343 KNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQ 477
KN+ ++M +EAI LF+ FE +YK R+++ +
Sbjct: 455 KNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLER 499
>U29536-1|AAA68791.3| 840|Caenorhabditis elegans Cullin protein 4
protein.
Length = 840
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 343 KNLEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQ 477
KN+ ++M +EAI LF+ FE +YK R+++ +
Sbjct: 492 KNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLER 536
>AL032663-9|CAA21764.2| 187|Caenorhabditis elegans Hypothetical
protein Y75B12B.1 protein.
Length = 187
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 41 DFLTVRFYGSDHEDCLDFSGA 103
DF RFY DH+ CLD + A
Sbjct: 148 DFWWNRFYNGDHDLCLDMTAA 168
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,820,561
Number of Sequences: 27780
Number of extensions: 358648
Number of successful extensions: 1061
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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