Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP14_F_L13
(1268 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.48
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 2.6
08_02_1084 - 24232968-24234779 30 3.4
07_01_0862 - 7172083-7172931 27 9.2
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.48
Identities = 27/84 (32%), Positives = 30/84 (35%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXK 1101
P PPPP G + AP PP P A P PP L+ K
Sbjct: 712 PPPPPPPPPANRSNGPSAPAPPLPPPLPA------AANKRNPPAPPPP--PLMTGKKAPA 763
Query: 1102 TPRXXXXPRAPKPPXWGVXXXPXP 1173
P P+APKPP G P P
Sbjct: 764 PP--PPPPQAPKPP--GTVPPPPP 783
Score = 32.3 bits (70), Expect = 0.84
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 5/93 (5%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXK 1101
P PPPP + G A A P PP P PP + K
Sbjct: 713 PPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAP--------PPPPLMTGKKAPAP 764
Query: 1102 TPRXXXXPR-----APKPPXWGVXXXPXPPQXK 1185
P P+ P PP G P PP K
Sbjct: 765 PPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSK 797
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +1
Query: 907 PXXXXPXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXX 1086
P P PPPP G + + P PP P L A P PP L
Sbjct: 544 PPPPPPPPPPPSGNKPAF---SPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVP 600
Query: 1087 KTXXKTPRXXXXPRAPKPP 1143
P P PP
Sbjct: 601 SPPPPPPPPPILPNRSVPP 619
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAA-----PXXPPNXPTLXXXXXALPLXXPXTXXPP 1065
P PPPPR + G A ++ P PP P +P P PP
Sbjct: 667 PPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPP 719
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 31.5 bits (68), Expect = 1.5
Identities = 23/74 (31%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Frame = -1
Query: 710 PPGXGGG*GXXXGGXXXFFF*KXGGXPXKKKRXGGGXXXFKXPHPPXGKRXXX*KK--XG 537
PPG GG G GG GG P GG + P P G ++ G
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGG 150
Query: 536 GGXXXXXFSXPGGG 495
GG PGGG
Sbjct: 151 GGGGGALARPPGGG 164
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 1.5
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 PPPGXEKXFXXXPPPXFFYXXXLXPXGGWGILKXXXPPPXLFFLXGXPP-XF*KKKXXXP 672
PPP PPP + P G + PPP G PP P
Sbjct: 1151 PPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMP 1210
Query: 673 PXXXP*PPPXPGGXXXXXP 729
P PPP PGG P
Sbjct: 1211 PGVPGGPPPPPGGRGLPAP 1229
Score = 29.5 bits (63), Expect = 5.9
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPP 1065
P PPPP+ G P PP PTL A P PP
Sbjct: 1063 PSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPP 1110
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Frame = +1
Query: 928 PPPPRGXEQXXGGGA-XAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXKT 1104
PPPP G GA AP PP P A P P P +
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHP-------AAPAPPPPA---PSPSAAGAGSGPPP 351
Query: 1105 PRXXXXPRAPKPPXWGVXXXPXP 1173
P P AP+PP G P P
Sbjct: 352 PPPPAAPAAPRPPGPGPGPPPPP 374
Score = 29.9 bits (64), Expect = 4.5
Identities = 22/74 (29%), Positives = 23/74 (31%)
Frame = +1
Query: 922 PXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPLXXPXTXXPPGXXLLXXKTXXK 1101
P PPPP G G+ P PP P P P PPG
Sbjct: 331 PAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRP----PGPGPGPPPPPG-AAGRGGGGPP 385
Query: 1102 TPRXXXXPRAPKPP 1143
P PRA PP
Sbjct: 386 PPALPGGPRARGPP 399
>08_02_1084 - 24232968-24234779
Length = 603
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 907 PXXXXPXPPPPRGXEQXXGGGAXAAPXXPPNXPTLXXXXXALPL 1038
P P PPP+ + G A AP PP+ P L PL
Sbjct: 95 PPPPLPQAPPPQQQKVHIPGVAAPAPNHPPSQPNLPPPAAPAPL 138
>07_01_0862 - 7172083-7172931
Length = 282
Score = 26.6 bits (56), Expect(2) = 9.2
Identities = 22/67 (32%), Positives = 23/67 (34%)
Frame = +1
Query: 496 PPPGXEKXFXXXPPPXFFYXXXLXPXGGWGILKXXXPPPXLFFLXGXPPXF*KKKXXXPP 675
PP EK PPP P +L PP L PP KKK PP
Sbjct: 135 PPTAEEKKLLLFPPPL--------PPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPP 186
Query: 676 XXXP*PP 696
P PP
Sbjct: 187 SPPPQPP 193
Score = 20.6 bits (41), Expect(2) = 9.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 670 PPXXXP*PPPXP 705
PP P PPP P
Sbjct: 208 PPKKKPLPPPSP 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,077,111
Number of Sequences: 37544
Number of extensions: 462042
Number of successful extensions: 1479
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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